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Attack graphs provide compact representations of the attack paths that an attacker can follow to compromise network resources by analysing network vulnerabilities and topology. These representations are a powerful tool for security risk…

Cryptography and Security · Computer Science 2016-06-23 Luis Muñoz-González , Daniele Sgandurra , Andrea Paudice , Emil C. Lupu

Posterior inference in directed graphical models is commonly done using a probabilistic encoder (a.k.a inference model) conditioned on the input. Often this inference model is trained jointly with the probabilistic decoder (a.k.a generator…

Machine Learning · Computer Science 2019-12-21 Amir Zadeh , Smon Hessner , Yao-Chong Lim , Louis-Phlippe Morency

People routinely infer the goals of others by observing their actions over time. Remarkably, we can do so even when those actions lead to failure, enabling us to assist others when we detect that they might not achieve their goals. How…

Artificial Intelligence · Computer Science 2020-10-27 Tan Zhi-Xuan , Jordyn L. Mann , Tom Silver , Joshua B. Tenenbaum , Vikash K. Mansinghka

Discovering statistically significant patterns from databases is an important challenging problem. The main obstacle of this problem is in the difficulty of taking into account the selection bias, i.e., the bias arising from the fact that…

Machine Learning · Statistics 2016-03-10 Shinya Suzumura , Kazuya Nakagawa , Mahito Sugiyama , Koji Tsuda , Ichiro Takeuchi

Phylogenetics is a classical methodology in computational biology that today has become highly relevant for medical investigation of single-cell data, e.g., in the context of cancer development. The exponential size of the tree space is,…

Populations and Evolution · Quantitative Biology 2023-01-25 Hazal Koptagel , Oskar Kviman , Harald Melin , Negar Safinianaini , Jens Lagergren

The maximal sensitivity of the Smith-Waterman (SW) algorithm has enabled its wide use in biological sequence database search. Unfortunately, the high sensitivity comes at the expense of quadratic time complexity, which makes the algorithm…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-11-17 Yongchao Liu , Bertil Schmidt

We employ the Bayesian improved cross entropy (BiCE) method for rare event estimation in static networks and choose the categorical mixture as the parametric family to capture the dependence among network components. At each iteration of…

Methodology · Statistics 2023-09-25 Jianpeng Chan , Iason Papaioannou , Daniel Straub

We design a predictive layer for structured-output prediction (SOP) that can be plugged into any neural network guaranteeing its predictions are consistent with a set of predefined symbolic constraints. Our Semantic Probabilistic Layer…

Machine Learning · Computer Science 2022-06-02 Kareem Ahmed , Stefano Teso , Kai-Wei Chang , Guy Van den Broeck , Antonio Vergari

The most fundamental problem in statistical causality is determining causal relationships from limited data. Probability trees, which combine prior causal structures with Bayesian updates, have been suggested as a possible solution. In this…

Machine Learning · Computer Science 2022-05-19 Tue Herlau

We present PPI++: a computationally lightweight methodology for estimation and inference based on a small labeled dataset and a typically much larger dataset of machine-learning predictions. The methods automatically adapt to the quality of…

Machine Learning · Statistics 2024-03-27 Anastasios N. Angelopoulos , John C. Duchi , Tijana Zrnic

In this paper we consider the problem of detecting statistically significant sequential patterns in multi-neuronal spike trains. These patterns are characterized by ordered sequences of spikes from different neurons with specific delays…

Neurons and Cognition · Quantitative Biology 2008-08-28 P. S. Sastry , K. P. Unnikrishnan

Probabilistic programming is the idea of writing models from statistics and machine learning using program notations and reasoning about these models using generic inference engines. Recently its combination with deep learning has been…

Programming Languages · Computer Science 2019-11-19 Wonyeol Lee , Hangyeol Yu , Xavier Rival , Hongseok Yang

We present Sequential Neural Likelihood (SNL), a new method for Bayesian inference in simulator models, where the likelihood is intractable but simulating data from the model is possible. SNL trains an autoregressive flow on simulated data…

Machine Learning · Statistics 2019-01-23 George Papamakarios , David C. Sterratt , Iain Murray

Simulation-Based Inference (SBI) offers a principled and flexible framework for conducting Bayesian inference in any situation where forward simulations are feasible. However, validating the accuracy and reliability of the inferred…

Instrumentation and Methods for Astrophysics · Physics 2026-01-21 James Alvey , Carlo R. Contaldi , Mauro Pieroni

Belief updating in Bayes nets, a well known computationally hard problem, has recently been approximated by several deterministic algorithms, and by various randomized approximation algorithms. Deterministic algorithms usually provide…

Artificial Intelligence · Computer Science 2013-02-18 Eugene Santos , Solomon Eyal Shimony , Edward Williams

In this paper we propose a new sampling-free approach to solve Bayesian model inversion problems that is an extension of the previously proposed spectral likelihood expansions (SLE) method. Our approach, called stochastic spectral…

Computation · Statistics 2021-04-21 P. -R. Wagner , S. Marelli , B. Sudret

Exact inference of marginals in probabilistic graphical models (PGM) is known to be intractable, necessitating the use of approximate methods. Most of the existing variational techniques perform iterative message passing in loopy graphs…

Artificial Intelligence · Computer Science 2023-10-31 Shivani Bathla , Vinita Vasudevan

Sampling multiple candidate programs at inference time is an effective way to improve LLM code generation. However, its benefit depends on reliably selecting a correct solution from the generated pool. We observe that this selection problem…

Machine Learning · Computer Science 2026-05-13 David Cho , Yifan Wang , Fanping Sui , Ananth Grama

The most widely studied explainable AI (XAI) approaches are unsound. This is the case with well-known model-agnostic explanation approaches, and it is also the case with approaches based on saliency maps. One solution is to consider…

Artificial Intelligence · Computer Science 2022-12-13 Yacine Izza , Xuanxiang Huang , Alexey Ignatiev , Nina Narodytska , Martin C. Cooper , Joao Marques-Silva

Information Retrieval (IR) is concerned with the identification of documents in a collection that are relevant to a given information need, usually represented as a query containing terms or keywords, which are supposed to be a good…

Information Retrieval · Computer Science 2013-02-01 Luis M. de Campos , Juan M. Fernandez-Luna , Juan F. Huete