Related papers: $d$-COS-R is FPT via Interval Deletion

We consider the problem of solving integer programs of the form $\min \{\,c^\intercal x\ \colon\ Ax=b, x\geq 0\}$, where $A$ is a multistage stochastic matrix in the following sense: the primal treedepth of $A$ is bounded by a parameter…

This paper presents a new anytime algorithm for the marginal MAP problem in graphical models. The algorithm is described in detail, its complexity and convergence rate are studied, and relations to previous theoretical results for the…

This paper studies the problem of reconstructing binary matrices that are only accessible through few evaluations of their discrete X-rays. Such question is prominently motivated by the demand in material science for developing a tool for…

Motif searching is an important step in the detection of rare events occurring in a set of DNA or protein sequences. One formulation of the problem is known as (l,d)-motif search or Planted Motif Search (PMS). In PMS we are given two…

The fundamental question considered in algorithms on strings is that of indexing, that is, preprocessing a given string for specific queries. By now we have a number of efficient solutions for this problem when the queries ask for an exact…

The Matching Cut problem is to decide if the vertex set of a connected graph can be partitioned into two non-empty sets $B$ and $R$ such that the edges between $B$ and $R$ form a matching, that is, every vertex in $B$ has at most one…

The authors and Fischer recently proved that any hereditary property of two-dimensional matrices (where the row and column order is not ignored) over a finite alphabet is testable with a constant number of queries, by establishing the…

For a graph class $\Pi$, the $\Pi$-Vertex Deletion problem has as input an undirected graph $G=(V,E)$ and an integer $k$ and asks whether there is a set of at most $k$ vertices that can be deleted from $G$ such that the resulting graph is a…

We examine a discrete random recursive tree growth process that, at each time step, either adds or deletes a node from the tree with probability $p$ and $1-p$, respectively. Node addition follows the usual uniform attachment model. For node…

In the bounded-degree cut problem, we are given a multigraph $G=(V,E)$, two disjoint vertex subsets $A,B\subseteq V$, two functions $\mathrm{u}_A, \mathrm{u}_B:V\to \{0,1,\ldots,|E|\}$ on $V$, and an integer $k\geq 0$. The task is to…

Combinatorial optimization problems (COPs) are an important research topic in various fields. In recent times, there have been many attempts to solve COPs using deep learning-based approaches. We propose a novel neural network model that…

For a given graph $G$, a depth-first search (DFS) tree $T$ of $G$ is an $r$-rooted spanning tree such that every edge of $G$ is either an edge of $T$ or is between a \textit{descendant} and an \textit{ancestor} in $T$. A graph $G$ together…

Linear tree constraints were introduced by Hofmann and Rodriguez in the context of amortized resource analysis for object oriented programs. More precisely, they gave a reduction from inference of resource types to constraint solving. Thus,…

Contention tree algorithm is initially invented as a solution to improve the stable throughput problem of Slotted ALOHA in multiple access schemes. Even though the throughput is stabilized in tree algorithms, the delay of requests may grow…

A merge tree is a fundamental topological structure used to capture the sub-level set (and similarly, super-level set) topology in scalar data analysis. The interleaving distance is a theoretically sound, stable metric for comparing merge…

Red-black (RB) trees are one of the most efficient variants of balanced binary search trees. However, they have always been blamed for being too complicated, hard to explain, and not suitable for pedagogical purposes. In the pioneering work…

The Consecutive Ones Property is an important notion for binary matrices, both from a theoretical and applied point of view. Tucker gave in 1972 a characterization of matrices that do not satisfy the Consecutive Ones Property in terms of…

The problem of $d$-Path Vertex Cover, $d$-PVC lies in determining a subset $F$ of vertices of a given graph $G=(V,E)$ such that $G \setminus F$ does not contain a path on $d$ vertices. The paths we aim to cover need not to be induced. It is…

We consider the coordinated vehicle platooning problem on a tree network with time constraints while the routes of vehicles are given. The problem is to coordinate the departure time of each vehicle to enable platoon formation hence…

This paper focuses on the efficient numerical algorithms of a three-field Biot's consolidation model. The approach begins with the introduction of innovative monolithic and global-in-time iterative decoupled algorithms, which incorporate…