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Pattern-diluted associative networks were introduced recently as models for the immune system, with nodes representing T-lymphocytes and stored patterns representing signalling protocols between T- and B-lymphocytes. It was shown earlier…

Disordered Systems and Neural Networks · Physics 2015-04-17 Elena Agliari , Alessia Annibale , Adriano Barra , A. C. C. Coolen , Daniele Tantari

The similarity between neural and immune networks has been known for decades, but so far we did not understand the mechanism that allows the immune system, unlike associative neural networks, to recall and execute a large number of…

Disordered Systems and Neural Networks · Physics 2017-03-20 Elena Agliari , Alessia Annibale , Adriano Barra , A. C. C. Coolen , Daniele Tantari

In this work we adopt a statistical mechanics approach to investigate basic, systemic features exhibited by adaptive immune systems. The lymphocyte network made by B-cells and T-cells is modeled by a bipartite spin-glass, where, following…

Cell Behavior · Quantitative Biology 2015-06-04 Elena Agliari , Adriano Barra , Silvia Bartolucci , Andrea Galluzzi , Francesco Guerra , Francesco Moauro

We introduce a bipartite, diluted and frustrated, network as a sparse restricted Boltzman machine and we show its thermodynamical equivalence to an associative working memory able to retrieve multiple patterns in parallel without falling…

Disordered Systems and Neural Networks · Physics 2013-05-30 Elena Agliari , Adriano Barra , Andrea Galluzzi , Francesco Guerra , Francesco Moauro

Recently we have used a cellular automata model which describes the dynamics of a multi-connected network to reproduce the refractory behavior and aging effects obtained in immunization experiments performed with mice when subjected to…

Statistical Mechanics · Physics 2007-05-23 Mauro Copelli , Rita M. Zorzenon dos Santos , Daniel A. Stariolo

Effective utilization of Multiple-Instruction-Multiple-Data (MIMD) parallel computers requires the application of good load balancing techniques. In this paper we show that heuristics derived from observation of complex natural systems,…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-10-05 James J. Clark

We argue that immune system is an adaptive complex system. It is shown that it has emergent properties. Its network structure is of the small world network type. The network is of the threshold type, which helps in avoiding autoimmunity. It…

Populations and Evolution · Quantitative Biology 2008-01-08 E. Ahmed , A. H. Hashish

We consider the mutual interactions, via cytokine exchanges, among helper lymphocytes, B lymphocytes and killer lymphocytes, and we model them as a unique system by means of a tripartite network. Each part includes all the different clones…

Biological Physics · Physics 2015-03-19 Elena Agliari , Adriano Barra , Francesco Guerra , Francesco Moauro

Some years ago a cellular automata model was proposed to describe the evolution of the immune repertoire of B cells and antibodies based on Jerne's immune network theory and shape-space formalism. Here we investigate if the networks…

Biological Physics · Physics 2012-01-31 Hallan Souza-e-Silva , Rita Maria Zorzenon dos Santos

The phenomenon of immunological memory has been known for a long time. But, the underlying mechanism is poorly understood. According to the theory of clonal selection the response to a specific invading antigen (e.g., bacteria) is offered…

Statistical Mechanics · Physics 2007-05-23 Debashish Chowdhury

We cast the metabolism of interacting cells within a statistical mechanics framework considering both, the actual phenotypic capacities of each cell and its interaction with its neighbors. Reaction fluxes will be the components of…

Molecular Networks · Quantitative Biology 2020-04-08 Jorge Fernandez-de-Cossio-Diaz , Roberto Mulet

We consider the multitasking associative network in the low-storage limit and we study its phase diagram with respect to the noise level $T$ and the degree $d$ of dilution in pattern entries. We find that the system is characterized by a…

Disordered Systems and Neural Networks · Physics 2013-04-17 Elena Agliari , Adriano Barra , Andrea Galluzzi , Marco Isopi

This paper deals with a new model for clonal network dynamics. We describe in detail this model and derive special equations governing immune system dynamics based on the general gradient type principles that can be inherent to a wide class…

Quantitative Methods · Quantitative Biology 2007-05-23 V. V. Gafiychuk , A. K. Prykarpatsky

A key feature of neural network architectures is their ability to support the simultaneous interaction among large numbers of units in the learning and processing of representations. However, how the richness of such interactions trades off…

We numerically study a dynamical system model of an idiotypic immune network with a small number of degrees of freedom. The model was originally introduced by Varela et.al., and describes antibodies interacting in a body in order to prepare…

Chaotic Dynamics · Physics 2009-10-31 Satoko Itaya , Tatsuya Uezu

Detection and classification of pulmonary nodules is a challenge in medical image analysis due to the variety of shapes and sizes of nodules and their high concealment. Despite the success of traditional deep learning methods in image…

Image and Video Processing · Electrical Eng. & Systems 2025-02-28 Junji Lin , Yi Zhang , Yunyue Pan , Yuli Chen , Chengchang Pan , Honggang Qi

We propose a framework for the joint inference of network topology, multi-type interaction kernels, and latent type assignments in heterogeneous interacting particle systems from multi-trajectory data. This learning task is a challenging…

Machine Learning · Statistics 2026-02-05 Quanjun Lang , Xiong Wang , Fei Lu , Mauro Maggioni

Understanding how brain networks learn and manage multiple tasks simultaneously is of interest in both neuroscience and artificial intelligence. In this regard, a recent research thread in theoretical neuroscience has focused on how…

Neurons and Cognition · Quantitative Biology 2024-08-05 Giacomo Vedovati , ShiNung Ching

Immune system is the most important defense system to resist human pathogens. In this paper we present an immune model with bipartite graphs theory. We collect data through COPE database and construct an immune cell- mediators network. The…

Adaptation and Self-Organizing Systems · Physics 2007-12-06 Sheng-Rong Zou , Yu-Jing Peng , Zhong-Wei Guo , Ta Zhou , Chang-gui Gu , Da-Ren He

Understanding the structural complexity and predictability of complex networks is a central challenge in network science. Although recent studies have revealed a relationship between compression-based entropy and link prediction…

Social and Information Networks · Computer Science 2025-10-14 Sebastián Brzovic , Cristóbal Rojas , Andrés Abeliuk
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