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We analyze a simple dynamical network model which describes the limited capacity of nodes to process the input information. For a suitable choice of the parameters, the information flow pattern is characterized by exponential distribution…

Data Analysis, Statistics and Probability · Physics 2012-04-19 Daniele Marinazzo , Mario Pellicoro , Guorong Wu , Leonardo Angelini , Sebastiano Stramaglia

We present a neuronal network model inspired by the Ising model, where each neuron is a binary spin ($s_i = \pm1$) interacting with its neighbors on a 2D lattice. Updates are asynchronous and follow Metropolis dynamics, with a…

Neurons and Cognition · Quantitative Biology 2025-06-10 Sajedeh Sarmastani , Maliheh Ghodrat , Yousef Jamali

While information processing in complex systems can be described in abstract, general terms, there are cases in which the relation between these computations and the physical substrate of the underlying system is itself of interest.…

Neurons and Cognition · Quantitative Biology 2017-08-16 Pedro A. M. Mediano , Murray Shanahan

Recent experiments have indicated that many biological systems self-organise near their critical point, which hints at a common design principle. While it has been suggested that information transmission is optimized near the critical…

Statistical Mechanics · Physics 2021-02-03 Matthijs Meijers , Sosuke Ito , Pieter Rein ten Wolde

Dynamical models implemented on the large scale architecture of the human brain may shed light on how function arises from the underlying structure. This is the case notably for simple abstract models, such as the Ising model. We compare…

We study the optimality conditions of information transfer in systems with memory in the low signal-to-noise ratio regime of vanishing input amplitude. We find that the optimal mutual information is represented by a maximum-variance of the…

Neurons and Cognition · Quantitative Biology 2010-08-13 Lubomir Kostal , Petr Lansky

Here we describe an "information based exchange" model of brain function that ascribes to neocortex, basal ganglia, and thalamus distinct network functions. The model allows us to analyze whole brain system set point measures, such as the…

Neurons and Cognition · Quantitative Biology 2015-09-17 James Kozloski

In this paper, we applied a deep neural network to study the issue of knowledge transferability between statistical mechanics models. The following computer experiment was conducted. A convolutional neural network was trained to solve the…

Disordered Systems and Neural Networks · Physics 2024-11-21 Diana Sukhoverkhova , Lev Shchur

We propose a new model based on the Ising model with the aim to study synaptic plasticity phenomena in neural networks. It is today well established in biology that the synapses or connections between certain types of neurons are…

Disordered Systems and Neural Networks · Physics 2016-07-22 Eugene Pechersky , Guillem Via , Anatoly Yambartsev

Periodic neural activity not locked to the stimulus or to motor responses is usually ignored. Here, we present new tools for modeling and quantifying the information transmission based on periodic neural activity that occurs with…

Neurons and Cognition · Quantitative Biology 2008-12-05 Kilian Koepsell , Friedrich T. Sommer

In order to investigate the role of the weight in weighted networks, the collective behavior of the Ising system on weighted regular networks is studied by numerical simulation. In our model, the coupling strength between spins is inversely…

Statistical Mechanics · Physics 2013-10-01 Menghui Li , Ying Fan , Jinshan Wu , Zengru Di

Information about external world is delivered to the brain in the form of structured in time spike trains. During further processing in higher areas, information is subjected to a certain condensation process, which results in formation of…

Neurons and Cognition · Quantitative Biology 2015-03-17 Alexander K. Vidybida

An outstanding problem in neuroscience is to understand how information is integrated across the many modules of the brain. While classic information-theoretic measures have transformed our understanding of feedforward information…

Neurons and Cognition · Quantitative Biology 2019-02-12 Daniel Toker , Friedrich T. Sommer

Now that spike trains from many neurons can be recorded simultaneously, there is a need for methods to decode these data to learn about the networks that these neurons are part of. One approach to this problem is to adjust the parameters of…

Quantitative Methods · Quantitative Biology 2011-06-10 John Hertz , Yasser Roudi , Joanna Tyrcha

We study the dynamics of the processes in the small-world networks with a power-law degree distribution where every node is considered to be in one of the two available statuses. We present an algorithm for generation of such network and…

Statistical Mechanics · Physics 2019-07-19 Bahruz Gadjiev , Tatiana Progulova

Humans and other organisms make decisions choosing between different options, with the aim to maximize the reward and minimize the cost. The main theoretical framework for modeling the decision-making process has been based on the highly…

Neurons and Cognition · Quantitative Biology 2024-11-19 Olga Tapinova , Tal Finkelman , Tamar Reitich-Stolero , Rony Paz , Assaf Tal , Nir S. Gov

There is currently growing interest in modeling the information diffusion on social networks across multi-disciplines. The majority of the corresponding research has focused on information diffusion independently, ignoring the network…

Physics and Society · Physics 2020-02-28 Chuang Liu , Nan Zhou , Xiu-Xiu Zhan , Gui-Quan Sun , Zi-Ke Zhang

Several types of biological networks have recently been shown to be accurately described by a maximum entropy model with pairwise interactions, also known as the Ising model. Here we present an approach for finding the optimal mappings…

Biological Physics · Physics 2015-05-14 Jeffrey D. Fitzgerald , Tatyana O. Sharpee

Network reliability is the probability that a dynamical system composed of discrete elements interacting on a network will be found in a configuration that satisfies a particular property. We introduce a new reliability property, Ising…

Statistical Mechanics · Physics 2016-11-23 Yihui Ren , Stephen Eubank , Madhurima Nath

The capacity to integrate information is a prominent feature of biological and cognitive systems. Integrated Information Theory (IIT) provides a mathematical approach to quantify the level of integration in a system, yet its computational…

Neurons and Cognition · Quantitative Biology 2020-08-31 Miguel Aguilera , Ezequiel Di Paolo
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