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A deep learning architecture is proposed to predict graspable locations for robotic manipulation. It considers situations where no, one, or multiple object(s) are seen. By defining the learning problem to be classification with null…

Robotics · Computer Science 2018-07-24 Fu-Jen Chu , Ruinian Xu , Patricio A. Vela

Protein language models have excelled in a variety of tasks, ranging from structure prediction to protein engineering. However, proteins are highly diverse in functions and structures, and current state-of-the-art models including the…

Biomolecules · Quantitative Biology 2023-02-27 Chang Ma , Haiteng Zhao , Lin Zheng , Jiayi Xin , Qintong Li , Lijun Wu , Zhihong Deng , Yang Lu , Qi Liu , Lingpeng Kong

Deep generative models (DGMs) have shown promise in image generation. However, most of the existing work learn the model by simply optimizing a divergence between the marginal distributions of the model and the data, and often fail to…

Machine Learning · Computer Science 2019-06-11 Kun Xu , Chongxuan Li , Jun Zhu , Bo Zhang

Gravitational-wave detection strategies are based on a signal analysis technique known as matched filtering. Despite the success of matched filtering, due to its computational cost, there has been recent interest in developing deep…

General Relativity and Quantum Cosmology · Physics 2022-11-03 Dwyer S. Deighan , Scott E. Field , Collin D. Capano , Gaurav Khanna

It is desirable in many multi-objective machine learning applications, such as multi-task learning with conflicting objectives and multi-objective reinforcement learning, to find a Pareto solution that can match a given preference of a…

Machine Learning · Computer Science 2024-02-19 Xiaoyuan Zhang , Xi Lin , Qingfu Zhang

The 0-1 knapsack problem is a well-known combinatorial optimisation problem. Approximation algorithms have been designed for solving it and they return provably good solutions within polynomial time. On the other hand, genetic algorithms…

Neural and Evolutionary Computing · Computer Science 2014-04-04 Jun He , Feidun He , Hongbin Dong

This paper develops intelligent algorithms for robots to reorient objects. Given the initial and goal poses of an object, the proposed algorithms plan a sequence of robot poses and grasp configurations that reorient the object from its…

Robotics · Computer Science 2017-05-29 Weiwei Wan , Kensuke Harada

This paper is a follow-up to a previous work where we defined and generated the set of all possible compromises of multilevel multiobjective linear programming problems (ML-MOLPP). In this paper, we introduce a new algorithm to solve…

Optimization and Control · Mathematics 2023-10-10 Mustapha Kaci , Sonia Radjef

As the structural databases continue to expand, efficient methods are required to search similar structures of the query structure from the database. There are many previous works about comparing protein 3D structures and scanning the…

Databases · Computer Science 2011-02-16 Gook-Pil Roh , Seung-won Hwang , Byoung-Kee Yi

We propose enhancing trajectory optimization methods through the incorporation of two key ideas: variable-grasp pose sampling and trajectory commitment. Our iterative approach samples multiple grasp poses, increasing the likelihood of…

Robotics · Computer Science 2023-05-23 Jiahe Pan , Kerry He , Jia Ming Ong , Akansel Cosgun

Structural prediction has long been considered critical in RNA research, especially following the success of AlphaFold2 in protein studies, which has drawn significant attention to the field. While recent advances in machine learning and…

Biomolecules · Quantitative Biology 2024-09-26 Jiaxing Yang

Since high resolution remote sensing image classification often requires a relatively high computation complexity, lightweight models tend to be practical and efficient. Model pruning is an effective method for model compression. However,…

Computer Vision and Pattern Recognition · Computer Science 2024-12-20 Guangwenjie Zou , Liang Yao , Fan Liu , Chuanyi Zhang , Xin Li , Ning Chen , Shengxiang Xu , Jun Zhou

Structured prediction requires searching over a combinatorial number of structures. To tackle it, we introduce SparseMAP: a new method for sparse structured inference, and its natural loss function. SparseMAP automatically selects only a…

Machine Learning · Statistics 2018-06-21 Vlad Niculae , André F. T. Martins , Mathieu Blondel , Claire Cardie

We present a multi-objective evolutionary optimization algorithm that uses Gaussian process (GP) regression-based models to select trial solutions in a multi-generation iterative procedure. In each generation, a surrogate model is…

Neural and Evolutionary Computing · Computer Science 2020-05-22 Xiaobiao Huang , Minghao Song , Zhe Zhang

Chemical plant design and optimisation have proven challenging due to the complexity of these real-world systems. The resulting complexity translates into high computational costs for these systems' mathematical formulations and simulation…

Neural and Evolutionary Computing · Computer Science 2022-04-28 Liezl Stander , Matthew Woolway , Terence L. Van Zyl

A variety of methods have been proposed for structure similarity calculation, which are called structure alignment or superposition. One major shortcoming in current structure alignment algorithms is in their inherent design, which is based…

Quantitative Methods · Quantitative Biology 2013-07-31 Xuefeng Cui , Shuai Cheng Li , Dongbo Bu , Ming Li

Modeling the relationship between chemical structure and molecular activity is a key goal in drug development. Many benchmark tasks have been proposed for molecular property prediction, but these tasks are generally aimed at specific,…

Quantitative Methods · Quantitative Biology 2020-10-05 Samuel G. Finlayson , Matthew B. A. McDermott , Alex V. Pickering , Scott L. Lipnick , Isaac S. Kohane

Predicting the cheapest sample size for the optimal stratification in multivariate survey design is a problem in cases where the population frame is large. A solution exists that iteratively searches for the minimum sample size necessary to…

Methodology · Statistics 2018-06-18 Mervyn O'Luing , Steven Prestwich , S. Armagan Tarim

Neuroblastoma is a strongly heterogeneous cancer with very diverse clinical courses that may vary from spontaneous regression to fatal progression; an accurate patient's risk estimation at diagnosis is essential to design appropriate tumor…

Quantitative Methods · Quantitative Biology 2018-02-23 Valerio Maggio , Marco Chierici , Giuseppe Jurman , Cesare Furlanello

Two important characteristics of multi-objective evolutionary algorithms are distribution and convergency. As a classic multi-objective genetic algorithm, NSGA-II is widely used in multi-objective optimization fields. However, in NSGA-II,…

Neural and Evolutionary Computing · Computer Science 2019-01-04 Xinwu Yang , Guizeng You , Chong Zhao , Mengfei Dou , Xinian Guo