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This paper studies the problem of Simultaneous Sparse Approximation (SSA). This problem arises in many applications which work with multiple signals maintaining some degree of dependency such as radar and sensor networks. In this paper, we…

Information Theory · Computer Science 2023-04-04 Sahar Sadrizadeh , Shahrzad Kiani , Mahdi Boloursaz , Farokh Marvasti

The Multi-Objective Real-Valued Gene-pool Optimal Mixing Evolutionary Algorithm (MO-RV-GOMEA) has been proven effective and efficient in solving real-world problems. A prime example is optimizing treatment plans for prostate cancer…

Neural and Evolutionary Computing · Computer Science 2022-03-18 Leah R. M. Dickhoff , Ellen M. Kerkhof , Heloisa H. Deuzeman , Carien L. Creutzberg , Tanja Alderliesten , Peter A. N. Bosman

Finding a good classifier is a multiobjective optimization problem with different error rates and the costs to be minimized. The receiver operating characteristic is widely used in the machine learning community to analyze the performance…

Neural and Evolutionary Computing · Computer Science 2014-12-19 Jiaqi Zhao , Vitor Basto Fernandes , Licheng Jiao , Iryna Yevseyeva , Asep Maulana , Rui Li , Thomas Bäck , Michael T. M. Emmerich

The potential benefit of migrating software design from Structured to Object Oriented Paradigm is manifolded including modularity, manageability and extendability. This design migration should be automated as it will reduce the time…

Software Engineering · Computer Science 2018-01-04 Md. Selim , Saeed Siddik , Alim Ul Gias , M. Abdullah-Al-Wadud , Shah Mostafa Khaled

Sequence alignment supports numerous tasks in bioinformatics, natural language processing, pattern recognition, social sciences, and others fields. While the alignment of two sequences may be performed swiftly in many applications, the…

Data Structures and Algorithms · Computer Science 2021-12-06 Eloi Araujo , Luiz Rozante , Diego P. Rubert , Fabio V. Martinez

Generating large ensembles of candidate conformations is standard for improving biomolecular structure prediction. Yet aimless sampling is inefficient and costly, producing many redundant conformations with limited diversity, so additional…

Biomolecules · Quantitative Biology 2025-10-21 Lihang Liu , Yang Liu , Xianbin Ye , Shanzhuo Zhang , Yuxin Li , Kunrui Zhu , Yang Xue , Xiaonan Zhang , Xiaomin Fang

This article presents a generic method to solve 2D multi-objective placement problem for free-form components. The proposed method is a relaxed placement technique combined with an hybrid algorithm based on a genetic algorithm and a…

Classical Physics · Physics 2010-06-01 Guillaume Jacquenot , Fouad Bennis , Jean-Jacques Maisonneuve , Philippe Wenger

Multi-modal Magnetic Resonance Imaging (MRI) offers complementary diagnostic information, but some modalities are limited by the long scanning time. To accelerate the whole acquisition process, MRI reconstruction of one modality from highly…

Image and Video Processing · Electrical Eng. & Systems 2025-01-09 Hao Zhang , Qi Wang , Jun Shi , Shihui Ying , Zhijie Wen

Motivation: Spliced alignment refers to the alignment of messenger RNA (mRNA) or protein sequences to eukaryotic genomes. It plays a critical role in gene annotation and the study of gene functions. Accurate spliced alignment demands…

Genomics · Quantitative Biology 2025-09-23 Siying Yang , Neng Huang , Heng Li

The ability to deal with systems parametric uncertainties is an essential issue for heavy self-driving vehicles in unconfined environments. In this sense, robust controllers prove to be efficient for autonomous navigation. However,…

We present an algorithm, dubbed Multi-Branch Matching Pursuit (MBMP), to solve the sparse recovery problem over redundant dictionaries. MBMP combines three different paradigms: being a greedy method, it performs iterative signal support…

Information Theory · Computer Science 2014-07-03 Marco Rossi , Alexander M. Haimovich , Yonina C. Eldar

Kernel based regularized interpolation is a well known technique to approximate a continuous multivariate function using a set of scattered data points and the corresponding function evaluations, or data values. This method has some…

Numerical Analysis · Mathematics 2018-07-26 Gabriele Santin , Dominik Wittwar , Bernard Haasdonk

Due to the significant delay and cost associated with experimental tests, a model based evaluation of concrete compressive strength is of high value, both for the purpose of strength prediction as well as the mixture optimization. In this…

Machine Learning · Computer Science 2021-06-15 Seyed Arman Taghizadeh Motlagh , Mehran Naghizadehrokni

Algorithms developed for scheduling applications on heterogeneous multiprocessor system focus on asingle objective such as execution time, cost or total data transmission time. However, if more than oneobjective (e.g. execution cost and…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-04-11 M. Rathna Devi , A. Anju

Designing therapeutic messenger RNA (mRNA) requires creating full-length transcripts that carefully balance stability, translation efficiency, and immune safety. To address this challenge, we propose ProMORNA, a multi-objective generation…

Machine Learning · Computer Science 2026-05-05 Zixi Shao , Tao Wang , Yibei Xiao , Tianyi Huang

To solve real-world expensive constrained multi-objective optimization problems (ECMOPs), surrogate/approximation models are commonly incorporated in evolutionary algorithms to pre-select promising candidate solutions for evaluation.…

Neural and Evolutionary Computing · Computer Science 2024-05-24 Kamrul Hasan Rahi

We present analysis of a novel tool for protein secondary structure prediction using the recently-investigated Neural Machine Translation framework. The tool provides a fast and accurate folding prediction based on primary structure with…

Quantitative Methods · Quantitative Biology 2021-05-11 Evan Weissburg , Ian Bulovic

A key problem in deep multi-attribute learning is to effectively discover the inter-attribute correlation structures. Typically, the conventional deep multi-attribute learning approaches follow the pipeline of manually designing the network…

Neural and Evolutionary Computing · Computer Science 2018-08-03 Siyu Huang , Xi Li , Zhi-Qi Cheng , Zhongfei Zhang , Alexander Hauptmann

Neural architecture search (NAS) in expressive search spaces is a computationally hard problem, but it also holds the potential to automatically discover completely novel and performant architectures. To achieve this we need effective…

Neural and Evolutionary Computing · Computer Science 2025-12-05 Adri Gómez Martín , Felix Möller , Steven McDonagh , Monica Abella , Manuel Desco , Elliot J. Crowley , Aaron Klein , Linus Ericsson

Sparse signal reconstruction algorithms have attracted research attention due to their wide applications in various fields. In this paper, we present a simple Bayesian approach that utilizes the sparsity constraint and a priori statistical…

Statistics Theory · Mathematics 2015-06-05 Ahmed A. Quadeer , Tareq Y. Al-Naffouri
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