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Immotile microbes inhabit nearly every environment on Earth, from soils and sediments to food matrices -- yet how they disperse through these physically confining environments is poorly understood. Here, we show that immotile microbial…

Major mergers are considered to be a significant source of turbulence in clusters. We performed a numerical simulation of a major merger event using nested-grid initial conditions, adaptive mesh refinement, radiative cooling of primordial…

Cosmology and Nongalactic Astrophysics · Physics 2017-06-28 W. Schmidt , C. Byrohl , J. F. Engels , C. Behrens , J. C. Niemeyer

Soft-granular media, such as dense emulsions, foams or tissues, exhibit either fluid- or solid-like properties depending on the applied external stresses. Whereas bulk rheology of such materials has been thoroughly investigated, the…

Soft Condensed Matter · Physics 2024-07-04 Michal Bogdan , Jesus Pineda , Mihir Durve , Leon Jurkiewicz , Sauro Succi , Giovanni Volpe , Jan Guzowski

We present a spherically-symmetric, steady-state model of galaxy clusters in which radiative cooling from the hot gas is balanced by heat transport through turbulent mixing. We assume that the gas is in hydrostatic equilibrium, and describe…

Astrophysics · Physics 2009-11-10 Woong-Tae Kim , Ramesh Narayan

We present a model of soft active particles that leads to a rich array of collective behavior found also in dense biological swarms of bacteria and other unicellular organisms. Our model uses only local interactions, such as Vicsek-type…

Soft Condensed Matter · Physics 2016-10-13 Ruben van Drongelen , Anshuman Pal , Carl P. Goodrich , Timon Idema

We present results from a study of the X-ray cluster population that forms within the CLEF cosmological hydrodynamics simulation, a large N-body/SPH simulation of the Lambda CDM cosmology with radiative cooling, star formation and feedback.…

We study particle clustering in a temperature stratified turbulence with small finite correlation time. It is shown that the temperature stratified turbulence strongly increases the degree of compressibility of particle velocity field. This…

Fluid Dynamics · Physics 2014-11-19 Tov Elperin , Nathan Kleeorin , Michael Liberman , Igor Rogachevskii

The clustering property of an equilibrium bipartite correlation is one of the most general thermodynamic properties in non-critical many-body quantum systems. Herein, we consider the thermalization properties of a system class exhibiting…

Statistical Mechanics · Physics 2020-05-27 Tomotaka Kuwahara , Keiji Saito

The collective behavior of swarms is extremely difficult to estimate or predict, even when the local agent rules are known and simple. The presented work seeks to leverage the similarities between fluids and swarm systems to generate a…

Adaptation and Self-Organizing Systems · Physics 2023-08-30 Hossein Haeri , Kshitij Jerath , Jacob Leachman

Clustering provides a common means of identifying structure in complex data, and there is renewed interest in clustering as a tool for the analysis of large data sets in many fields. A natural question is how many clusters are appropriate…

Data Analysis, Statistics and Probability · Physics 2007-05-23 Susanne Still , William Bialek

Cooling processes in nature are typically generated by external contact with a cold reservoir or bath. According to the laws of thermodynamics, the final temperature of a system is determined by the temperature of the environment. Here, we…

Soft Condensed Matter · Physics 2025-03-06 Alexander P. Antonov , Marco Musacchio , Hartmut Löwen , Lorenzo Caprini

Positive feedback regulation is ubiquitous in cell signaling networks, often leading to binary outcomes in response to graded stimuli. However, the role of such feedbacks in clustering, and in spatial spreading of activated molecules, has…

Soft Condensed Matter · Physics 2015-05-13 Jayajit Das , Mehran Kardar , Arup K. Chakraborty

Previous work has suggested that disordered swarms of flying insects can be well modeled as self-gravitating systems, as long as the "gravitational" interaction is adaptive. Motivated by this work we compare the predictions of the classic,…

Swarms of self-propelled particles exhibit complex behavior that can arise from simple models, with large changes in swarm behavior resulting from small changes in model parameters. We investigate the steady-state swarms formed by…

Soft Condensed Matter · Physics 2015-06-03 Nguyen HP Nguyen , Eric Jankowski , Sharon C. Glotzer

We introduce a general formalism to analyze nucleation phenomena in inhomogeneous media which considers the influence of the metastable phase, which is treated as a heat bath in which clusters are embedded, in the dynamics of the nucleation…

Statistical Mechanics · Physics 2009-11-10 D. Reguera , J. M. Rubi

In a recent paper List, Elsholtz and Seeley [Phil. Trans. Roy. Soc. B. 364 (2009) 755] have devised an agent-based model of the the nest-choice dynamics in swarms of honeybees, and have concluded that both interdependence and independence…

Populations and Evolution · Quantitative Biology 2009-09-10 Tobias Galla

Penguins huddling in a cold wind are represented by a two-dimensional, continuum model. The huddle boundary evolves due to heat loss to the huddle exterior and through the reorganisation of penguins as they seek to regulate their heat…

Fluid Dynamics · Physics 2023-06-16 Samuel J. Harris , N. R. McDonald

As collective states of animal groups go, swarms of midge insects pose a number of puzzling questions. Their ordering polarization parameter is quite small and the insects are weakly coupled among themselves but strongly coupled to the…

Statistical Mechanics · Physics 2026-02-12 L. L. Bonilla , R. González-Albaladejo

Bacterial swarming is a rapid mass-migration, in which thousands of cells spread collectively to colonize a surface. Physically, swarming is a natural example of active particles that use energy to generate motion. Accordingly,…

Soft Condensed Matter · Physics 2019-11-14 Avraham Be`er , Bella Ilkanaiv , Renan Gross , Daniel B. Kearns , Sebastian Heidenreich , Markus Bär , Gil Ariel

A quantitative understanding of the dynamics of bee colonies is important to support global efforts to improve bee health and enhance pollination services. Traditional approaches focus either on theoretical models or data-centred…

Biological Physics · Physics 2022-11-07 Karina Arias-Calluari , Theotime Colin , Tanya Latty , Mary Myerscough , Eduardo G. Altmann