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Lattice model of directed self avoiding walk is used to investigate adsorption properties of a semiflexible sequential copolymer chain on an impenetrable curved surface on a hexagonal lattice in two dimensions. Walks of the copolymer chains…

Statistical Mechanics · Physics 2010-06-02 Pramod Kumar Mishra

Selective targeting of membranes with a specific receptor profile is an ongoing challenge in targeted drug delivery. We investigate the adsorption of copolymers on a multicomponent receptor-covered surface using grand-canonical Monte Carlo…

Soft Condensed Matter · Physics 2026-05-27 Vid Ravnik , Urban Bren , Tine Curk

Using a reference system approach, we develop an analytical theory for the adsorption of random heteropolymers with exponentially decaying and/or oscillating sequence correlations on planar homogeneous surfaces. We obtain a simple equation…

Soft Condensed Matter · Physics 2009-11-11 Alexey Polotsky , Friederike Schmid , Andreas Degenhard

Finding the optimal random packing of non-spherical particles is an open problem with great significance in a broad range of scientific and engineering fields. So far, this search has been performed only empirically on a case-by-case basis,…

Soft Condensed Matter · Physics 2013-08-06 Adrian Baule , Romain Mari , Lin Bo , Louis Portal , Hernan A. Makse

We generalize the `filtering spectrum' [1] to probe scales along different directions by spatial coarse-graining. This multi-dimensional filtering spectrum quantifies the spectral content of flows that are not necessarily homogeneous. From…

Fluid Dynamics · Physics 2023-10-20 Dongxiao Zhao , Hussein Aluie

We report a detailed and systematic study of wave propagation through a stochastic absorbing random medium. Stochastic absorption is modeled by introducing an attenuation constant per unit length $\alpha$ in the free propagation region of…

Disordered Systems and Neural Networks · Physics 2007-05-23 Sandeep K. Joshi , Debendranath Sahoo , A. M. Jayannavar

Connectedness percolation phenomena in the two-dimensional (2D) packing of binary mixtures of disks with different diameters were studied numerically. The packings were produced using random sequential adsorption (RSA) model with…

Soft Condensed Matter · Physics 2024-04-02 N. I. Lebovka , M. R. Petryk , N. V. Vygornitskii

The subject of this work is the adsorption transition of a long flexible self-avoiding polymer chain onto a rigid thin rod. The rod is represented by a cylinder of radius R with a short-ranged attractive surface potential for the chain…

Statistical Mechanics · Physics 2009-11-11 Andreas Hanke

We report a detailed and systematic study of wave propagation through a stochastic absorbing random medium. Stochastic absorption is modeled by introducing an attenuation constant per unit length $\alpha$ in the free propagation region of…

Disordered Systems and Neural Networks · Physics 2009-10-31 Sandeep K. Joshi , Debendranath Sahoo , A. M. Jayannavar

We investigate the process of random sequential adsorption of polydisperse particles whose size distribution exhibits a power-law dependence in the small size limit, $P(R)\sim R^{\alpha-1}$. We reveal a relation between pattern formation…

Statistical Mechanics · Physics 2009-10-31 N. V. Brilliantov , Yu. A. Andrienko , P. L. Krapivsky , J. Kurths

The behavior of annealed branched polymers near adsorbing surfaces plays a fundamental role in many biological and industrial processes. Most importantly single stranded RNA in solution tends to fold up and self-bind to form a highly…

Soft Condensed Matter · Physics 2016-08-10 Jef Wagner , Gonca Erdemci-Tandogan , Roya Zandi

Adsorption on a boundary line confining a monolayer of particles self-assembling into clusters is studied by MC simulations. We focus on a system of particles interacting via competing interaction potential in which effectively short-range…

Soft Condensed Matter · Physics 2020-01-22 E. Bildanau , J. Pȩkalski , V. Vikhrenko , A. Ciach

The structure of random sphere packings in mechanical equilibrium in prescribed stress states, as studied by molecular dynamics simulations, strongly depends on the assembling procedure. Frictionless packings in the limit of low pressure…

Disordered Systems and Neural Networks · Physics 2007-05-23 Jean-Noel Roux

This chapter deals with various aspects related to the adsorption of long chain-like macromolecules (polymers) onto solid surfaces. Physical aspects of the adsorption mechanism are elaborated mainly at thermodynamical equilibrium. The basic…

Soft Condensed Matter · Physics 2007-05-23 David Andelman , Roland R. Netz

The asymmetric simple exclusion process (ASEP) is an important model from statistical physics describing particles that hop randomly from one site to the next along an ordered lattice of sites, but only if the next site is empty. ASEP has…

Classical Analysis and ODEs · Mathematics 2014-06-30 Michael Margaliot , Alon Raveh , Yoram Zarai

The rheology of cohesive granular materials, under a constant pressure condition, is studied using molecular dynamics simulations. Depending on the shear rate, pressure, and interparticle cohesiveness, the system exhibits four distinctive…

Soft Condensed Matter · Physics 2018-09-26 Yuta Yamaguchi , Satoshi Takada , Takahiro Hatano

We study the conformational properties of charged polymers in a solvent in the presence of structural obstacles correlated according to a power law $\sim x^{-a}$. We work within the continuous representation of a model of linear chain…

Soft Condensed Matter · Physics 2013-11-25 V. Blavatska , C. von Ferber

We study surface effects in amorphous polymer systems by means of computer simulation. In the framework of molecular dynamics, we present two different methods to prepare such surfaces. {\em Free} surfaces are stabilized solely by…

Condensed Matter · Physics 2009-10-28 Thorsten Hapke , Andreas Linke , Gerald Paetzold , Dieter W. Heermann

We analyze the recently proposed "pattern-matching" phase of a Gaussian random heteropolymer adsorbed on a disordered substrate [S. Srebnik, A.K. Chakraborty and E.I. Shakhnovich, Phys. Rev. Lett. 77, 3157 (1996)]. By mapping the problem to…

Statistical Mechanics · Physics 2009-10-30 T. Hwa , D. Cule

Contacts between particles in dense, sheared suspensions are believed to underpin much of their rheology. Roughness and adhesion are known to constrain the relative motion of particles, and thus globally affect the shear response, but an…