English
Related papers

Related papers: The crystallization of asymmetric patchy models fo…

200 papers

The influence of non-uniform distribution of nuclei on crystallization kinetics of amorphous materials is investigated. This case cannot be described by the well-known Johnson-Mehl-Avrami (JMA) equation, which is only valid under the…

Condensed Matter · Physics 2009-10-28 Patric Uebele , Helmut Hermann

Understanding the observed variability in the number of homologs of a gene is a very important, unsolved problem that has broad implications for research into co-evolution of structure and function, gene duplication, pseudogene formation…

Biomolecules · Quantitative Biology 2007-05-23 Boris Shakhnovich , Eric Deeds , Charles Delisi , Eugene Shakhnovich

A phase field theory of polycrystalline solidification is presented that is able to describe the nucleation and growth of anisotropic particles with different crystallographic orientation in three dimensions. As opposed with the…

Materials Science · Physics 2009-11-11 T. Pusztai , G. Bortel , L. Granasy

The effect of molecule size (excluded volume) and the range of interaction on the surface tension, phase diagram and nucleation properties of a model globular protein is investigated using a combinations of Monte Carlo simulations and…

Statistical Mechanics · Physics 2015-03-13 Patrick Grosfils , James F. Lutsko

An important strategy to stabilize emulsions is to arrest coalescence of the constituent droplets with an opposing rheological force. Colloidal particles adsorbed on the surface of emulsion droplets in a Pickering emulsion become…

Soft Condensed Matter · Physics 2019-03-04 Zhaoyu Xie , Christopher J. Burke , Badel Mbanga , Patrick T. Spicer , Timothy J. Atherton

We investigate the structural and thermodynamic properties of a model of particles with $2$ patches of type $A$ and $10$ patches of type $B$. Particles are placed on the sites of a face centered cubic lattice with the patches oriented along…

Soft Condensed Matter · Physics 2015-06-18 J. M. Tavares , N. G. Almarza , M. M. Telo da Gama

This paper is devoted to the study of phase transitions associated to a large family of Gagliardo-Nirenberg-Sobolev interpolation inequalities on the sphere depending on one parameter. We characterize symmetry and symmetry breaking regimes,…

Analysis of PDEs · Mathematics 2024-10-08 Esther Bou Dagher , Jean Dolbeault

The statistical properties of protein folding within the {\phi}^4 model are investigated. The calculation is performed using statistical mechanics and path integral method. In particular, the evolution of heat capacity in term of…

Biological Physics · Physics 2013-09-03 M. Januar , A. Sulaiman , L. T. Handoko

Recent experiments with degenerate molecular gases dressed by elliptically polarized microwave fields have enabled new control of dipolar interactions via engineered anisotropy. We reveal a symmetry structure of the dipolar interaction that…

Quantum Gases · Physics 2025-10-13 D. Baillie

Crystalline membranes are one of the rare examples of bidimensional systems in which long-range order can stabilise an ordered phase in the thermodynamic limit. By a careful analysis of the Goldstone modes counting, we propose a symmetry…

Statistical Mechanics · Physics 2019-09-11 O. Coquand

We describe results of measurements of the orientational motion of glass microrods in a microchannel flow, following the orientational motion of particles with different shapes. We determine how the orientational dynamics depends on the…

Fluid Dynamics · Physics 2016-01-21 J. Einarsson , B. M. Mihiretie , A. Laas , S. Ankardal , J. R. Angilella , D. Hanstorp , B. Mehlig

Symmetry is closely intertwined with the function, genetics, and chemical properties of multiprotein complexes. Here, we explore the relation between structural symmetry and the ability of membrane proteins to sense and induce membrane…

Biological Physics · Physics 2018-10-19 Federico Elías-Wolff , Alexander Lyubartsev , Erik G. Brandt , Martin Lindén

We study numerically the crystallization of a hard-sphere mixture with 8\% polydispersity. Although often used as a model glass former, for small system sizes we observe crystallization in molecular dynamics simulations. This opens the…

Soft Condensed Matter · Physics 2016-09-05 Matteo Campo , Thomas Speck

Gradual disruption of the actin cytoskeleton induces a series of structural shape changes in cells leading to a transformation of cylindrical cell extensions into a periodic chain of "pearls". Quantitative measurements of the pearling…

Biological Physics · Physics 2010-08-06 Roy Bar-Ziv , Tsvi Tlusty , Elisha Moses , Samuel A. Safran , Alexander Bershadsky

The rapid progress in precisely designing the surface decoration of patchy colloidal particles offers a new, yet unexperienced freedom to create building entities for larger, more complex structures in soft matter systems. However, it is…

Soft Condensed Matter · Physics 2012-06-14 G. Doppelbauer , E. G. Noya , E. Bianchi , G. Kahl

Elucidating the interplay of stress and geometry is a fundamental scientific question arising in multiple fields. In this work, we investigate the geometric frustration of crystalline caps confined on the sphere in both elastic and plastic…

Soft Condensed Matter · Physics 2022-07-22 Jingyuan Chen , Zhenwei Yao

We describe some general results that constrain the dynamical fluctuations that can occur in non-equilibrium steady states, with a focus on molecular dynamics. That is, we consider Hamiltonian systems, coupled to external heat baths, and…

Statistical Mechanics · Physics 2017-11-22 Robert L. Jack , Marcus Kaiser , Johannes Zimmer

The internal dynamics of strongly interacting systems and that of biomolecules such as proteins display several important analogies, despite the huge difference in their characteristic energy and length scales. For example, in all such…

Biological Physics · Physics 2015-05-30 Pietro Faccioli

Induced by proteins within the cell membrane or by differential growth, heating, or swelling, spontaneous curvatures can drastically affect the morphology of thin bodies and induce mechanical instabilities. Yet, the interaction of…

Soft Condensed Matter · Physics 2018-01-31 Matteo Pezzulla , Norbert Stoop , Mark P. Steranka , Abdikhalaq J. Bade , Douglas P. Holmes

We investigate the inelastic hard disk gas sheared by two parallel bumpy walls (Couette-flow). In our molecular dynamic simulations we found a sensitivity to the asymmetries of the initial condition of the particle places and velocities and…

Soft Condensed Matter · Physics 2009-10-31 M. Sasvari , J. Kertesz , D. E. Wolf