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T-distributed stochastic neighbour embedding (t-SNE) is a widely used data visualisation technique. It differs from its predecessor SNE by the low-dimensional similarity kernel: the Gaussian kernel was replaced by the heavy-tailed Cauchy…

Machine Learning · Computer Science 2020-07-20 Dmitry Kobak , George Linderman , Stefan Steinerberger , Yuval Kluger , Philipp Berens

Dimensionality reduction methods such as t-SNE are designed to preserve local neighborhood structure but do not explicitly account for how probability mass is distributed, often leading to distortions of data density. We reformulate…

Machine Learning · Computer Science 2026-05-05 Maksim Kazanskii

Node representations, or embeddings, are low-dimensional vectors that capture node properties, typically learned through unsupervised structural similarity objectives or supervised tasks. While recent efforts have focused on explaining…

Machine Learning · Computer Science 2025-10-17 Simone Piaggesi , André Panisson , Megha Khosla

This work is concerned with the continuum limit of a graph-based data visualization technique called the t-Distributed Stochastic Neighbor Embedding (t-SNE), which is widely used for visualizing data in a variety of applications, but is…

Machine Learning · Statistics 2026-04-15 Jeff Calder , Zhonggan Huang , Ryan Murray , Adam Pickarski

Nonlinear data visualization using t-distributed stochastic neighbor embedding (t-SNE) enables the representation of complex single-cell transcriptomic landscapes in two or three dimensions to depict biological populations accurately.…

Genomics · Quantitative Biology 2024-10-02 Hui Ma , Kai Chen

An increasing number of multi-view data are being published by studies in several fields. This type of data corresponds to multiple data-views, each representing a different aspect of the same set of samples. We have recently proposed…

Machine Learning · Computer Science 2021-11-08 Theodoulos Rodosthenous , Vahid Shahrezaei , Marina Evangelou

Dimensionality reduction techniques aim at representing high-dimensional data in low-dimensional spaces to extract hidden and useful information or facilitate visual understanding and interpretation of the data. However, few of them take…

Machine Learning · Computer Science 2022-10-25 Yan Sun , Yi Han , Jicong Fan

Several network embedding models have been developed for unsigned networks. However, these models based on skip-gram cannot be applied to signed networks because they can only deal with one type of link. In this paper, we present our signed…

Social and Information Networks · Computer Science 2017-03-16 Shuhan Yuan , Xintao Wu , Yang Xiang

Network embedding, which learns low-dimensional vector representation for nodes in the network, has attracted considerable research attention recently. However, the existing methods are incapable of handling billion-scale networks, because…

Social and Information Networks · Computer Science 2018-09-11 Ziwei Zhang , Peng Cui , Haoyang Li , Xiao Wang , Wenwu Zhu

Network embedding has recently attracted lots of attentions in data mining. Existing network embedding methods mainly focus on networks with pairwise relationships. In real world, however, the relationships among data points could go beyond…

Social and Information Networks · Computer Science 2018-02-01 Ke Tu , Peng Cui , Xiao Wang , Fei Wang , Wenwu Zhu

Consider observation data, comprised of n observation vectors with values on a set of attributes. This gives us n points in attribute space. Having data structured as a tree, implied by having our observations embedded in an ultrametric…

Information Retrieval · Computer Science 2012-02-17 Fionn Murtagh , Pedro Contreras

The quality of GAN-generated images on the MNIST dataset was explored in this paper by comparing them to the original images using t-distributed stochastic neighbor embedding (t- SNE) visualization. A GAN was trained with the dataset to…

Computer Vision and Pattern Recognition · Computer Science 2023-05-18 Okan Düzyel

Temporal heterogeneous information network (temporal HIN) embedding, aiming to represent various types of nodes of different timestamps into low dimensional spaces while preserving structural and semantic information, is of vital importance…

Social and Information Networks · Computer Science 2024-06-18 Qijie Bai , Jiawen Guo , Haiwei Zhang , Changli Nie , Lin Zhang , Xiaojie Yuan

We introduce an improved unsupervised clustering protocol specially suited for large-scale structured data. The protocol follows three steps: a dimensionality reduction of the data, a density estimation over the low dimensional…

Machine Learning · Computer Science 2019-11-05 Joan Garriga , Frederic Bartumeus

Learning representations of well-trained neural network models holds the promise to provide an understanding of the inner workings of those models. However, previous work has either faced limitations when processing larger networks or was…

Machine Learning · Computer Science 2024-06-17 Konstantin Schürholt , Michael W. Mahoney , Damian Borth

Recent advances in the field of network embedding have shown that low-dimensional network representation is playing a critical role in network analysis. Most existing network embedding methods encode the local proximity of a node, such as…

Social and Information Networks · Computer Science 2019-06-11 Junliang Guo , Linli Xu , Jingchang Liu

Correct risk estimation of policyholders is of great significance to auto insurance companies. While the current tools used in this field have been proven in practice to be quite efficient and beneficial, we argue that there is still a lot…

Artificial Intelligence · Computer Science 2023-03-02 Joseph Levitas , Konstantin Yavilberg , Oleg Korol , Genadi Man

Optical neural networks offer a route to low-latency and energy-efficient inference by encoding computation in light propagation. However, most existing implementations rely on planar photonic circuits or discretely spaced diffractive…

Dimensionality reduction techniques are essential for visualizing and analyzing high-dimensional biological sequencing data. t-distributed Stochastic Neighbor Embedding (t-SNE) is widely used for this purpose, traditionally employing the…

Machine Learning · Computer Science 2025-12-19 Avais Jan , Prakash Chourasia , Sarwan Ali , Murray Patterson

The recent advancements in computational power and machine learning algorithms have led to vast improvements in manifold areas of research. Especially in finance, the application of machine learning enables both researchers and…

Statistical Finance · Quantitative Finance 2020-05-21 Sven Husmann , Antoniya Shivarova , Rick Steinert
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