English
Related papers

Related papers: Delivery of time-varying stimuli using ChR2

200 papers

The spectacular successes of recurrent neural network models where key parameters are adjusted via backpropagation-based gradient descent have inspired much thought as to how biological neuronal networks might solve the corresponding…

Neurons and Cognition · Quantitative Biology 2023-01-18 Yuhan Helena Liu , Stephen Smith , Stefan Mihalas , Eric Shea-Brown , Uygar Sümbül

Hair cells of the auditory and vestibular systems are capable of detecting sounds that induce sub-nanometer vibrations of the hair bundle, below the stochastic noise levels of the surrounding fluid. Hair bundles of certain species are also…

Neurons and Cognition · Quantitative Biology 2019-05-23 Justin Faber , Dolores Bozovic

We examine the response of type II excitable neurons to trains of synaptic pulses, as a function of the pulse frequency and amplitude. We show that the resonant behavior characteristic of type II excitability, already described for harmonic…

Neurons and Cognition · Quantitative Biology 2015-06-26 Pablo Balenzuela , Javier M. Buldu , Marcos Casanova , Jordi Garcia-Ojalvo

The classic Hodgkin-Huxley model is widely used for understanding the electrophysiological dynamics of a single neuron. While applying a constant current to the system results in a single voltage spike, it is possible to produce more…

Quantitative Methods · Quantitative Biology 2021-07-23 Kayleigh Campbell , Laura Staugler , Andrea Arnold

Analog, low-voltage electronics show great promise in producing silicon neurons (SiNs) with unprecedented levels of energy efficiency. Yet, their inherently high susceptibility to process, voltage and temperature (PVT) variations, and noise…

Neurons and Cognition · Quantitative Biology 2021-12-30 Tai Miyazaki Kirby , Luka Ribar , Rodolphe Sepulchre

We perform a numerical study on the application of electromagnetic flux on a heterogeneous network of Chialvo neurons represented by a ring-star topology. Heterogeneities are realized by introducing additive noise modulations on both the…

Dynamical Systems · Mathematics 2024-02-09 Indranil Ghosh , Sishu Shankar Muni , Hammed Olawale Fatoyinbo

Neurons in the nervous system are submitted to distinct sources of noise, such as ionic-channel and synaptic noise, which introduces variability in their responses to repeated presentations of identical stimuli. This motivates the use of…

We present a theoretical study aiming at model fitting for sensory neurons. Conventional neural network training approaches are not applicable to this problem due to lack of continuous data. Although the stimulus can be considered as a…

Neurons and Cognition · Quantitative Biology 2017-09-28 R. Ozgur Doruk , Kechen Zhang

We theoretically propose and numerically validate an all-optical scheme to generate optical pulse trains with varying peak-powers and durations. A shaping of the spectral phase thanks to discrete $\pi/2$ phase shifts enables an efficient…

Optics · Physics 2021-03-29 Ugo Andral , Christophe Finot

Avian hair cells depend on electrical resonance for frequency selectivity. The upper bound of the frequency range is limited by the RC time constant of hair cells because the sharpness of tuning requires that the resonance frequency must be…

Biological Physics · Physics 2021-12-28 Kuni H. Iwasa

Since the first recordings made of evoked action potentials it has become apparent that the responses of individual neurons to ongoing physiologically relevant input, are highly variable. This variability is manifested in non-stationary…

Neurons and Cognition · Quantitative Biology 2010-08-10 Avner Wallach , Danny Eytan , Asaf Gal , Christoph Zrenner , Ron Meir , Shimon Marom

Environmental sound classification systems often do not perform robustly across different sound classification tasks and audio signals of varying temporal structures. We introduce a multi-stream convolutional neural network with temporal…

Sound · Computer Science 2019-01-28 Xinyu Li , Venkata Chebiyyam , Katrin Kirchhoff

Neurons in the central nervous system are affected by complex and noisy signals due to fluctuations in their cellular environment and in the inputs they receive from many other cells 1,2. Such noise usually increases the probability that a…

Neurons and Cognition · Quantitative Biology 2008-05-06 Boris S. Gutkin , Juergen Jost , Henry C. Tuckwell

Several integrate-to-threshold models with differing temporal integration mechanisms have been proposed to describe the accumulation of sensory evidence to a prescribed level prior to motor response in perceptual decision-making tasks. An…

Neurons and Cognition · Quantitative Biology 2009-01-16 Xiang Zhou , KongFatt Wong-Lin , Philip Holmes

The objective of this study was to characterize hemodynamic changes during trans-vascular stimulation of the renal nerve and their dependence on stimulation parameters. We employed a stimulation catheter inserted in the right renal artery…

Quantitative Methods · Quantitative Biology 2024-06-06 Filippo Agnesi , Lucia Carlucci , Gia Burjanadze , Fabio Bernini , Khatia Gabisonia , John W Osborn , Silvestro Micera , Fabio A. Recchia

Humans and animals exhibit a range of interesting behaviors in dynamic environments, and it is unclear how our brains actively reformat this dense sensory information to enable these behaviors. Experimental neuroscience is undergoing a…

Neurons and Cognition · Quantitative Biology 2023-11-07 Aran Nayebi

We demonstrate that carefully adjusting the tokenizer of the Whisper speech recognition model significantly improves the precision of word-level timestamps when applying dynamic time warping to the decoder's cross-attention scores. We…

Machine Learning · Computer Science 2024-08-30 Laurin Wagner , Bernhard Thallinger , Mario Zusag

We report a theoretical/computational approach for modeling the current-voltage characteristics of sensing proteins. The modeling is applied to a couple of transmembrane proteins, bacteriorhodopsin and proteorhodopsin, sensitive to visible…

Biological Physics · Physics 2014-02-04 E Alfinito , J Pousset , L Reggiani

Living systems implement and execute an extraordinary plethora of computational tasks. The inherent degree of large scale coordination emerges as a global property, from the intricate sea of microscopic interactions. The brain, with its…

Disordered Systems and Neural Networks · Physics 2018-01-03 Duccio Fanelli , Francesco Ginelli , Roberto Livi , Niccolò Zagli , Clement Zankoc

The temporal activity of many biological systems, including neural circuits, exhibits fluctuations simultaneously varying over a large range of timescales. The mechanisms leading to this temporal heterogeneity are yet unknown. Here we show…

Disordered Systems and Neural Networks · Physics 2022-08-03 Merav Stern , Nicolae Istrate , Luca Mazzucato