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Metadata, often termed "data about data," is crucial for organizing, understanding, and managing vast omics datasets. It aids in efficient data discovery, integration, and interpretation, enabling users to access, comprehend, and utilize…

Curated databases have become important sources of information across scientific disciplines, and due to the manual work of experts, often become important reference works. Features such as provenance tracking, archiving, and data citation…

Programming Languages · Computer Science 2021-07-20 Simon Fowler , Simon D. Harding , Joanna Sharman , James Cheney

We introduce a new visual analytic approach to the study of scientific discoveries and knowledge diffusion. Our approach enhances contemporary co-citation network analysis by enabling analysts to identify co-citation clusters of cited…

General Literature · Computer Science 2017-10-24 Chaomei Chen , Jian Zhang , Michael S. Vogeley

Scientific literature is one of the most significant resources for sharing knowledge. Researchers turn to scientific literature as a first step in designing an experiment. Given the extensive and growing volume of literature, the common…

Computation and Language · Computer Science 2021-09-28 Xintong Zhao , Steven Lopez , Semion Saikin , Xiaohua Hu , Jane Greenberg

Research organisations and their research outputs have been growing considerably in the past decades. This large body of knowledge attracts various stakeholders, e.g., for knowledge sharing, technology transfer, or potential collaborations.…

Digital Libraries · Computer Science 2024-04-05 Gautam Kishore Shahi , Oliver Hummel

Information access needs to be uncomplicated, users rather use incorrect data which is easily received than correct information which is harder to obtain. Querying bibliographic metadata from digital libraries mainly supports simple textual…

Digital Libraries · Computer Science 2019-06-18 Christin Katharina Kreutz , Michael Wolz , Ralf Schenkel

This lightning talk paper discusses an initial data set that has been gathered to understand the use of software in research, and is intended to spark wider interest in gathering more data. The initial data analyzes three months of articles…

Software Engineering · Computer Science 2018-07-23 Udit Nangia , Daniel S. Katz

An important goal for digital libraries is to enable researchers to more easily explore related work. While citation data is often used as an indicator of relatedness, in this paper we demonstrate that digital access records (e.g.…

Digital Libraries · Computer Science 2007-05-23 Stefan Pohl , Filip Radlinski , Thorsten Joachims

Scholars who want to research a scientific topic must take time to read, extract meaning, and identify connections across many papers. As scientific literature grows, this becomes increasingly challenging. Meanwhile, authors summarize prior…

Human-Computer Interaction · Computer Science 2023-02-15 Srishti Palani , Aakanksha Naik , Doug Downey , Amy X. Zhang , Jonathan Bragg , Joseph Chee Chang

To retrieve and compare scientific data of simulations and experiments in materials science, data needs to be easily accessible and machine readable to qualify and quantify various materials science phenomena. The recent progress in open…

Materials Science · Physics 2025-03-25 Balduin Katzer , Steffen Klinder , Katrin Schulz

This paper proposes a Bibliographic system intends to exchange bibliographic information of survey/review articles by relying on Web service technology. It allows researchers and university students to interact with system via single…

Digital Libraries · Computer Science 2015-09-15 Mutaz Beraka , Abdullah Al-Dhelaan , Mznah Al-Rodhaan

Motivation: The rapid growth of biological data has intensified the need for transparent, reproducible, and well-documented computational workflows. The ability to clearly connect the steps of a workflow in the code with their description…

Computation and Language · Computer Science 2026-03-10 Clémence Sebe , Olivier Ferret , Aurélie Névéol , Mahdi Esmailoghli , Ulf Leser , Sarah Cohen-Boulakia

Bibliometric techniques are not yet widely used to enhance retrieval processes in digital libraries, although they offer value-added effects for users. In this workshop we will explore how statistical modelling of scholarship, such as…

Information Retrieval · Computer Science 2014-01-19 Philipp Mayr , Andrea Scharnhorst , Birger Larsen , Philipp Schaer , Peter Mutschke

Automatically extracted metadata from scholarly documents in PDF formats is usually noisy and heterogeneous, often containing incomplete fields and erroneous values. One common way of cleaning metadata is to use a bibliographic reference…

Digital Libraries · Computer Science 2019-06-21 Athar Sefid , Jian Wu , Allen C. Ge , Jing Zhao , Lu Liu , Cornelia Caragea , Prasenjit Mitra , C. Lee Giles

Measuring international research collaboration is necessary when evaluating, for example, the efficacy of policy meant to increase cooperation between countries, but is currently very difficult as bibliographic records contain only…

Digital Libraries · Computer Science 2019-06-03 Ba Xuan Nguyen , Jesse David Dinneen , Markus Luczak-Roesch

We compare two distinct approaches for querying data in the context of the life sciences. The first approach utilizes conventional databases to store the data and intuitive form-based interfaces to facilitate easy querying of the data.…

Information Retrieval · Computer Science 2012-10-03 Amir H. Asiaee , Prashant Doshi , Todd Minning , Satya Sahoo , Priti Parikh , Amit Sheth , Rick L. Tarleton

Writing complex computer programs to study scientific problems requires careful planning and an in-depth knowledge of programming languages and tools. In this chapter the importance of using the right tool for the right problem is…

Computational Physics · Physics 2010-06-17 Helmut G. Katzgraber

The availability of metadata for scientific documents is pivotal in propelling scientific knowledge forward and for adhering to the FAIR principles (i.e. Findability, Accessibility, Interoperability, and Reusability) of research findings.…

Information Retrieval · Computer Science 2025-01-10 Zeyd Boukhers , Cong Yang

Scientific document classification is a critical task for a wide range of applications, but the cost of obtaining massive amounts of human-labeled data can be prohibitive. To address this challenge, we propose a weakly-supervised approach…

Computation and Language · Computer Science 2023-06-13 Ran Xu , Yue Yu , Joyce C. Ho , Carl Yang

Academic literature retrieval is concerned with the selection of papers that are most likely to match a user's information needs. Most of the retrieval systems are limited to list-output models, in which the retrieval results are isolated…

Information Retrieval · Computer Science 2017-11-27 Danping Liao , Yuntao Qian