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In this dissertation, a fully object-oriented, fully relativistic, multi-dimensional Particle-In-Cell code was developed and applied to answer key questions in plasma-based accelerator research. The simulations increase the understanding of…

Computational Physics · Physics 2015-03-03 Roy G. Hemker

Molecular representation learning is pivotal for various molecular property prediction tasks related to drug discovery. Robust and accurate benchmarks are essential for refining and validating current methods. Existing molecular property…

Chemical Physics · Physics 2024-06-27 Shikun Feng , Jiaxin Zheng , Yinjun Jia , Yanwen Huang , Fengfeng Zhou , Wei-Ying Ma , Yanyan Lan

Classical molecular dynamics simulations of hydrogen plasmas have been performed with emphasis on the analysis of equilibration process. Theoretical basis of simulation model as well as numerically relevant aspects -- such as the proper…

Plasma Physics · Physics 2024-02-07 M. A. Gigosos , D. Gonzalez-Herrero , R. Florido , A. Calisti , S. Ferri , B. Talin

AI models are increasingly prevalent in high-stakes environments, necessitating thorough assessment of their capabilities and risks. Benchmarks are popular for measuring these attributes and for comparing model performance, tracking…

Artificial Intelligence · Computer Science 2024-11-21 Anka Reuel , Amelia Hardy , Chandler Smith , Max Lamparth , Malcolm Hardy , Mykel J. Kochenderfer

We propose a simulation-based approach for performance modeling of parallel applications on high-performance computing platforms. Our approach enables full-system performance modeling: (1) the hardware platform is represented by an abstract…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-11-06 Gen Xu , Huda Ibeid , Xin Jiang , Vjekoslav Svilan , Zhaojuan Bian

Computational models of acoustic wave propagation are frequently used in transcranial ultrasound therapy, for example, to calculate the intracranial pressure field or to calculate phase delays to correct for skull distortions. To allow…

Optimization of beamlines and lattices is a common problem in accelerator physics, which is usually solved with semi-analytical methods and numerical optimization routines. However, these are usually of the gradient-free or…

Accelerator Physics · Physics 2025-07-14 Francisco Huhn , Francesco M. Velotti

Molecular dynamics (MD) simulation techniques are widely used for various natural science applications. Increasingly, machine learning (ML) force field (FF) models begin to replace ab-initio simulations by predicting forces directly from…

Computational Physics · Physics 2023-08-29 Xiang Fu , Zhenghao Wu , Wujie Wang , Tian Xie , Sinan Keten , Rafael Gomez-Bombarelli , Tommi Jaakkola

Method comparisons are essential to provide recommendations and guidance for applied researchers, who often have to choose from a plethora of available approaches. While many comparisons exist in the literature, these are often not neutral…

Methodology · Statistics 2022-12-07 Sarah Friedrich , Tim Friede

Calibration of expensive simulation models involves an emulator based on simulation outputs generated across various parameter settings to replace the actual model. Noisy outputs of stochastic simulation models require many simulation…

Methodology · Statistics 2025-05-08 Özge Sürer

Certifying the performance of quantum computers requires standardized tests. We propose a simple energy estimation benchmark that is motivated from quantum chemistry. With this benchmark we statistically characterize the noisy outcome of…

Quantum Physics · Physics 2024-05-09 Andreas J. C. Woitzik , Lukas Hoffmann , Andreas Buchleitner , Edoardo G. Carnio

Quantum communication devices, such as quantum repeaters, quantum memories, or quantum channels, are unavoidably exposed to imperfections. However, the presence of imperfections can be tolerated, as long as we can verify such devices retain…

Quantum Physics · Physics 2011-05-26 Nathan Killoran , Norbert Lütkenhaus

Benchmarks shape scientific conclusions about model capabilities and steer model development. This creates a feedback loop: stronger benchmarks drive better models, and better models demand more discriminative benchmarks. Ensuring benchmark…

Computation and Language · Computer Science 2025-10-01 Arda Uzunoglu , Tianjian Li , Daniel Khashabi

The prevalence of scientific workflows with high computational demands calls for their execution on various distributed computing platforms, including large-scale leadership-class high-performance computing (HPC) clusters. To handle the…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-02-10 Tainã Coleman , Henri Casanova , Ketan Maheshwari , Loïc Pottier , Sean R. Wilkinson , Justin Wozniak , Frédéric Suter , Mallikarjun Shankar , Rafael Ferreira da Silva

Quantum optimisation is emerging as a promising approach alongside classical heuristics and specialised hardware, yet its performance is often difficult to assess fairly. Traditional benchmarking methods, rooted in digital complexity…

Quantum Physics · Physics 2025-12-10 Frank Phillipson

We present an alternative approach to the derivation of benchmarks for quantum channels, such as memory or teleportation channels. Using the concept of effective entanglement and the verification thereof, a testing procedure is derived…

Quantum Physics · Physics 2009-10-09 Hauke Häseler , Norbert Lütkenhaus

We discuss guidelines for evaluating the performance of parameterized stochastic solvers for optimization problems, with particular attention to systems that employ novel hardware, such as digital quantum processors running variational…

Scientific software is often driven by multiple parameters that affect both accuracy and performance. Since finding the optimal configuration of these parameters is a highly complex task, it extremely common that the software is used…

Computational Engineering, Finance, and Science · Computer Science 2016-08-17 Diego Fabregat-Traver , Ahmed E. Ismail , Paolo Bientinesi

Concomitant with the rapid development of quantum technologies, challenging demands arise concerning the certification and characterization of devices. The promises of the field can only be achieved if stringent levels of precision of…

Quantum Physics · Physics 2020-07-03 J. Eisert , D. Hangleiter , N. Walk , I. Roth , D. Markham , R. Parekh , U. Chabaud , E. Kashefi

Benchmarking is key for developing and comparing optimization algorithms. In this paper, a CUDA-based real parameter optimization benchmark (cuROB) is introduced. Test functions of diverse properties are included within cuROB and…

Neural and Evolutionary Computing · Computer Science 2014-07-30 Ke Ding , Ying Tan
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