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We investigate the size of the embedded regular tree rooted at a vertex in a $d$ regular random graph. We show that almost always, the radius of this tree will be ${1/2}\log n$, where $n$ is the number of vertices in the graph. And we give…

Combinatorics · Mathematics 2010-08-10 Eran Makover , Jeffrey McGowan

Fix an integer $n \geq 1$, and consider the set of all connected finite simple graphs on $n$ vertices. For each $G$ in this set, let $I(G)$ denote the edge ideal of $G$ in the polynomial ring $R = K[x_1,\ldots,x_n]$. We initiate a study of…

Combinatorics · Mathematics 2020-03-18 Takayuki Hibi , Kyouko Kimura , Kazunori Matsuda , Adam Van Tuyl

Orthologous genes, which arise through speciation, play a key role in comparative genomics and functional inference. In particular, graph-based methods allow for the inference of orthology estimates without prior knowledge of the underlying…

Populations and Evolution · Quantitative Biology 2025-02-14 Anna Lindeberg , Guillaume E. Scholz , Nicolas Wieseke , Marc Hellmuth

Consider a random graph process where vertices are chosen from the interval $[0,1]$, and edges are chosen independently at random, but so that, for a given vertex $x$, the probability that there is an edge to a vertex $y$ decreases as the…

We introduce a notion of a girth-regular graph as a $k$-regular graph for which there exists a non-descending sequence $(a_1, a_2, \dots, a_k)$ (called the signature) giving, for every vertex $u$ of the graph, the number of girth cycles the…

Combinatorics · Mathematics 2019-11-05 Primož Potočnik , Janoš Vidali

Graphs are used in many disciplines to model the relationships that exist between objects in a complex discrete system. Researchers may wish to compare a network of interest to a "typical" graph from a family (or ensemble) of graphs which…

Combinatorics · Mathematics 2025-08-08 Catherine Greenhill

An ordered graph is a graph together with a linear order on its vertices. A hereditary property of ordered graphs is a collection of ordered graphs closed under taking induced ordered subgraphs. If P is a property of ordered graphs, then…

Combinatorics · Mathematics 2007-05-23 József Balogh , Béla Bollobás , Robert Morris

If $\Gamma$ is a graph for which every edge is in exactly one clique of order $\omega$, then one can form a new graph with vertex set equal to these cliques. This is a generalization of the line graph of $\Gamma$. We discover many general…

Combinatorics · Mathematics 2025-02-26 Robert R. Petro , Connor M. Phillips

An $(n,m)$-graph is a graph with $n$ types of arcs and $m$ types of edges. A homomorphism of an $(n,m)$-graph $G$ to another $(n,m)$-graph $H$ is a vertex mapping that preserves the adjacencies along with their types and directions. The…

Combinatorics · Mathematics 2023-10-17 Soumen Nandi , Sagnik Sen , S Taruni

The $2$-cell embeddings of graphs on closed surfaces have been widely studied. It is well known that ($2$-cell) embedding a given graph $G$ on a closed orientable surface is equivalent to cyclically ordering the edges incident to each…

Combinatorics · Mathematics 2015-03-06 Ricky X. F. Chen , Christian M. Reidys

Understanding how genes interact and relate to each other is a fundamental question in biology. However, current practices for describing these relationships, such as drawing diagrams or graphs in a somewhat arbitrary manner, limit our…

Other Quantitative Biology · Quantitative Biology 2023-11-16 Yanying Wu

The aim of this paper is to present a few versions of the Riemann-Hurwitz formula for a regular branched covering of graphs. By a graph, we mean a finite connected multigraph. The genus of a graph is defined as the rank of the first…

Algebraic Topology · Mathematics 2015-05-05 A. D. Mednykh

We describe an infinite family of graphs $G_n$, where $G_n$ has $n$ vertices, independence number at least $n/4$, and no set of less than $\sqrt{n}/2$ vertices intersects all its maximum independent sets. This is motivated by a question of…

Combinatorics · Mathematics 2021-04-06 Noga Alon

A dessin is a $2$-cell embedding of a connected $2$-coloured bipartite graph into an orientable closed surface. A dessin is regular if its group of colour- and orientation-preserving automorphisms acts regularly on the edges. In this paper…

Combinatorics · Mathematics 2018-06-13 Kan Hu , Naer Wang , Roman Nedela

A graph $G=(V,E)$ is called $d$-rigid if, for a generic embedding of its vertices in $\mathbb{R}^d$, every edge-length preserving continuous motion of the vertices preserves the distances between all pairs of non-adjacent vertices as well.…

Combinatorics · Mathematics 2026-03-02 Michael Krivelevich , Alan Lew , Peleg Michaeli

Graphs are important data representations for describing objects and their relationships, which appear in a wide diversity of real-world scenarios. As one of a critical problem in this area, graph generation considers learning the…

Machine Learning · Computer Science 2022-10-06 Xiaojie Guo , Liang Zhao

Fix positive integers d;m such that $(m^2+4m+6)/6 \leq d < (m^2+4m+6)/3$ (the so-called Range A for space curves). Let G(d;m) be the maximal genus of a smooth and connected curve, of degree d, $C \subset P^3$ such that $h^0(I_C(m-1)) = 0$.…

Algebraic Geometry · Mathematics 2020-10-28 Edoardo Ballico , Philippe Ellia

Graph embeddings, wherein the nodes of the graph are represented by points in a continuous space, are used in a broad range of Graph ML applications. The quality of such embeddings crucially depends on whether the geometry of the space…

Machine Learning · Statistics 2022-02-03 Francesco Di Giovanni , Giulia Luise , Michael Bronstein

In 2020, Cameron et al. introduced the restricted numerical range of a digraph (directed graph) as a tool for characterizing digraphs and studying their algebraic connectivity. In particular, digraphs with a restricted numerical range of a…

Combinatorics · Mathematics 2021-06-03 Thomas R. Cameron , H. Tracy Hall , Ben Small , Alexander Wiedemann

Recently, so-called treebased phylogenetic networks have gained considerable interest in the literature, where a treebased network is a network that can be constructed from a phylogenetic tree, called the base tree, by adding additional…

Populations and Evolution · Quantitative Biology 2019-11-28 Mareike Fischer , Michelle Galla , Lina Herbst , Yangjing Long , Kristina Wicke