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The local arrangement of atoms is one of the most important predictors of mechanical and functional properties of materials. However, algorithms for identifying the geometrical arrangements of atoms in complex materials systems are lacking.…

Materials Science · Physics 2019-04-15 Arash Dehghan Banadaki , Jason J. Maldonis , Paul M. Voyles , Srikanth Patala

We introduce a local order metric (LOM) that measures the degree of order in the neighborhood of an atomic or molecular site in a condensed medium. The LOM maximizes the overlap between the spatial distribution of sites belonging to that…

Computational Physics · Physics 2018-02-21 Fausto Martelli , Hsin-Yu Ko , Erdal C. Oguz , Roberto Car

Rings comprising chemically bonded atoms are essential topological motifs for the structural ordering of network-forming materials. Quantification of such larger motifs beyond short-range pair correlation is essential for understanding the…

Materials Science · Physics 2023-11-15 Motoki Shiga , Akihiko Hirata , Yohei Onodera , Hirokazu Masai

Quantifying the level of atomic disorder within materials is critical to understanding how evolving local structural environments dictate performance and durability. Here, we leverage graph neural networks to define a physically…

Disordered Systems and Neural Networks · Physics 2023-08-02 James Chapman , Tim Hsu , Xiao Chen , Tae Wook Heo , Brandon C. Wood

Formulating order metrics that sensitively quantify the degree of order/disorder in many-particle systems in $d$-dimensional Euclidean space $\mathbb{R}^d$ across length scales is an outstanding challenge in physics, chemistry, and…

Statistical Mechanics · Physics 2025-02-05 Charles Emmett Maher , Salvatore Torquato

Amorphous materials are coming within reach of realistic computer simulations, but new approaches are needed to fully understand their intricate atomic structures. Here, we show how machine-learning (ML)-based techniques can give new,…

We propose a family of order parameters to detect the symmetry fractionalization class of anyons in 2D topological phases. This fractionalization class accounts for the projective, as opposed to linear, representations of the symmetry group…

Quantum Physics · Physics 2019-12-09 José Garre-Rubio , Sofyan Iblisdir

In this study, we added vacancies adjacent to a Si/Ge interface to create a disordered structure. The structure was then relaxed using various strategies. We applied Procrustes shape analysis for disorder quantification and identifying…

Atomic Physics · Physics 2023-03-08 Jinchen Han , Henry T. Aller , Alan J. H. McGaughey

When flat or on a firm mechanical substrate, the atomic composition and atomistic structure of two-dimensional crystals dictate their chemical, electronic, optical, and mechanical properties. These properties change when the two-dimensional…

Mesoscale and Nanoscale Physics · Physics 2014-02-27 Alejandro A. Pacheco Sanjuan , Mehrshad Mehboudi , Edmund O. Harriss , Humberto Terrones , Salvador Barraza-Lopez

Structural quantities such as order parameters and correlation functions are often employed to gain insight into the physical behavior and properties of condensed matter systems. While standard quantities for characterizing structure exist,…

Soft Condensed Matter · Physics 2017-08-23 Aaron S. Keys , Christopher R. Iacovella , Sharon C. Glotzer

We show that the information gained in spectroscopic experiments regarding the number and distribution of atomic environments can be used as a valuable constraint in the refinement of the atomic-scale structures of nanostructured or…

Materials Science · Physics 2015-05-14 Matthew J Cliffe , Martin T. Dove , D. A. Drabold , Andrew L. Goodwin

We present a permutation-invariant distance between atomic configurations, defined through a functional representation of atomic positions. This distance enables to directly compare different atomic environments with an arbitrary number of…

Materials Science · Physics 2015-09-30 Gregoire Ferre , Jean-Bernard Maillet , Gabriel Stoltz

Scientists use imaging to identify objects of interest and infer properties of these objects. The locations of these objects are often measured with error, which when ignored leads to biased parameter estimates and inflated variance.…

Evaluating the (dis)similarity of crystalline, disordered and molecular compounds is a critical step in the development of algorithms to navigate automatically the configuration space of complex materials. For instance, a structural…

Materials Science · Physics 2020-02-06 Sandip De , Albert P. Bartók , Gábor Csányi , Michele Ceriotti

The increasingly common applications of machine-learning schemes to atomic-scale simulations have triggered efforts to better understand the mathematical properties of the mapping between the Cartesian coordinates of the atoms and the…

Chemical Physics · Physics 2021-09-24 Sergey N. Pozdnyakov , Liwei Zhang , Christoph Ortner , Gábor Csányi , Michele Ceriotti

We continue our investigation of the configuration space of general relativity begun in I (gr-qc/9411009). Here we examine the Hamiltonian constraint when the spatial geometry is momentarily static (MS). We show that MS configurations…

General Relativity and Quantum Cosmology · Physics 2009-10-22 Jemal Guven , Niall Ó Murchadha

In previous work, we introduced a method for modeling a configuration of objects in 2D and 3D images using a mathematical "medial/skeletal linking structure." In this paper, we show how these structures allow us to capture positional…

Computer Vision and Pattern Recognition · Computer Science 2017-06-02 James Damon , Ellen Gasparovic

Theoretical frameworks used to qualitatively and quantitatively describe nuclear dynamics in solids are often based on the harmonic approximation. However, this approximation is known to become inaccurate or to break down completely in many…

Materials Science · Physics 2020-09-02 Florian Knoop , Thomas A. R. Purcell , Matthias Scheffler , Christian Carbogno

Local structure characterization with the bond-orientational order parameters q4, q6, ... introduced by Steinhardt et al. has become a standard tool in condensed matter physics, with applications including glass, jamming, melting or…

Soft Condensed Matter · Physics 2014-02-10 Walter Mickel , Sebastian C. Kapfer , Gerd E. Schröder-Turk , Klaus Mecke

Combining quantum and Bayesian principles leads to optimality in metrology, but the optimisation equations involved are often hard to solve. This work mitigates this problem with a novel class of measurement strategies for quantities…

Quantum Physics · Physics 2024-09-06 Jesús Rubio
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