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Various subsets of self-avoiding walks naturally appear when investigating existing methods designed to predict the 3D conformation of a protein of interest. Two such subsets, namely the folded and the unfoldable self-avoiding walks, are…

Biomolecules · Quantitative Biology 2013-06-19 Jacques M. Bahi , Christophe Guyeux , Kamel Mazouzi , Laurent Philippe

A phase diagram for a surface-interacting long flexible polymer chain in a two-dimensional poor solvent where the possibility of collapse exists is determined using exact enumeration method. A model of a self-attracting self avoiding walk…

Statistical Mechanics · Physics 2007-05-23 Yashwant Singh , Debaprasad Giri , Sanjay Kumar

Self-avoiding walks are a simple and well-known model of long, flexible polymers in a good solvent. Polymers being pulled away from a surface by an external agent can be modelled with self-avoiding walks in a half-space, with a Boltzmann…

Statistical Mechanics · Physics 2015-06-22 Nicholas R. Beaton

We have studied self-avoiding walks contained within an $L \times L$ square whose end-points can lie anywhere within, or on, the boundaries of the square. We prove that such walks behave, asymptotically, as walks crossing a square (WCAS),…

Mathematical Physics · Physics 2022-12-23 Anthony J Guttmann , Iwan Jensen , Aleksander L Owczarek

Self-avoiding walks (SAWs) were introduced in chemistry to model the real-life behavior of chain-like entities such as solvents and polymers, whose physical volume prohibits multiple occupation of the same spatial point. In mathematics, a…

Data Structures and Algorithms · Computer Science 2013-10-01 Franc Brglez

Various types of walks on complex networks have been used in recent years to model search and navigation in several kinds of systems, with particular emphasis on random walks. This gives valuable information on network properties, but…

Disordered Systems and Neural Networks · Physics 2019-01-24 Carlos P. Herrero

The phase diagram and surface critical behaviour of the vertex-interacting self-avoiding walk are examined using transfer matrix methods extended using DMRG and coupled with finite-size scaling. Particular attention is paid to the critical…

Statistical Mechanics · Physics 2015-06-12 Damien P. Foster , Claire Pinettes

Motivated by recent claims of a proof that the length scale exponent for the end-to-end distance scaling of self-avoiding walks is precisely $7/12=0.5833...$, we present results of large-scale simulations of self-avoiding walks and…

Statistical Mechanics · Physics 2009-11-07 T. Prellberg

Prudent walks are self-avoiding walks which cannot step towards an already occupied vertex. We introduce a new model of adsorbing prudent walks on the square lattice, which start on an impenetrable surface and accrue a fugacity $a$ with…

Mathematical Physics · Physics 2021-12-20 Nicholas R. Beaton , Gerasim K. Iliev

We consider a self-avoiding walk model (SAW) on the faces of the square lattice $\mathbb{Z}^2$. This walk can traverse the same face twice, but crosses any edge at most once. The weight of a walk is a product of local weights: each square…

Probability · Mathematics 2021-12-17 Alexander Glazman , Ioan Manolescu

This article is concerned with self-avoiding walks (SAW) on $\mathbb{Z}^{d}$ that are subject to a self-attraction. The attraction, which rewards instances of adjacent parallel edges, introduces difficulties that are not present in ordinary…

Probability · Mathematics 2018-12-11 Alan Hammond , Tyler Helmuth

Understanding the role of self-propulsion on the conformational properties of active filamentous objects has relevance in biology. In this context, we consider a flexible bead-spring model polymer for which along with both attractive and…

Soft Condensed Matter · Physics 2022-02-22 Subhajit Paul , Suman Majumder , Wolfhard Janke

Pedestrian groups are commonly found in crowds but research on their social aspects is comparatively lacking. To fill that void in literature, we study the dynamics of collision avoidance between pedestrian groups (in particular dyads) and…

Physics and Society · Physics 2023-05-31 Adrien Gregorj , Zeynep Yücel , Francesco Zanlungo , Claudio Feliciani , Takayuki Kanda

We use complete enumeration and Monte Carlo techniques to study two-dimensional self-avoiding polymer chains with quenched ``charges'' $\pm 1$. The interaction of charges at neighboring lattice sites is described by $q_i q_j$. We find that…

Soft Condensed Matter · Physics 2009-10-30 Ido Golding , Yacov Kantor

In order to study long chain polymers many lattice models accommodate a pulling force applied to a particular part of the chain, often a free endpoint. This is in addition to well-studied features such as energetic interaction between the…

Statistical Mechanics · Physics 2023-07-19 C. J. Bradly , A. L. Owczarek

We introduce branching annihilating attracting walk (BAAW) in one dimension. The attracting walk is implemented by a biased hopping in such a way that a particle prefers hopping to a nearest neighbor located on the side where the nearest…

Statistical Mechanics · Physics 2020-05-08 Su-Chan Park

A recently introduced extension of the Corner Transfer Matrix Renormalisation Group (CTMRG) method useful for the study of self-avoiding walk type models is presented in detail and applied to a class of interacting self-avoiding walks due…

Statistical Mechanics · Physics 2007-05-23 D. P. Foster , C. Pinettes

The Interacting Growth Walk (IGW) is a kinetic algorithm proposed recently for generating long, compact, self avoiding walks. The growth process in IGW is tuned by the so called growth temperature $T' = 1/(k_B \beta ')$. On a square lattice…

Condensed Matter · Physics 2009-11-07 S. L. Narasimhan , P. S. R. Krishna , M. Ramanadham , K. P. N. Murthy , V. Sridhar

In the present paper, we investigate the collapsed phase of the interacting partially-directed self-avoiding walk (IPDSAW) that was introduced in Zwanzig and Lauritzen (1968). We provide sharp asymptotics of the partition function inside…

Probability · Mathematics 2022-02-23 Alexandre Legrand , Nicolas Pétrélis

We study the collapse transition of a polymer on a square lattice with both nearest-neighbor and next nearest-neighbor interactions, by calculating the exact partition function zeros up to chain length 36. The transition behavior is much…

Statistical Mechanics · Physics 2012-06-06 Jae Hwan Lee , Seung-Yeon Kim , Julian Lee
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