Related papers: An involution on \beta(1,0)-trees
The purpose of this article is to show how the isotropy subgroup of leaf permutations on binary trees can be used to systematically identify tree-informative invariants relevant to models of phylogenetic evolution. In the quartet case, we…
Superinvolutions on graded associative algebras constitute a source of Lie and Jordan superalgebras. Graded versions of the classical Albert and Albert-Riehm Theorems on the existence of superinvolutions are proven. Surprisingly, the…
We introduce the notion of evolution on sets and study several sets endowed with this structure and obtain some results about this new notion.
This article presents a new way to understand the descriptive ability of tree shape statistics. Where before tree shape statistics were chosen by their ability to distinguish between macroevolutionary models, the ``resolution'' presented in…
It was recently observed by de Vienne et al. that a simple square root transformation of distances between taxa on a phylogenetic tree allowed for an embedding of the taxa into Euclidean space. While the justification for this was based on…
In this paper we look at polynomials arising from statistics on the classes of involutions, $I_n$, and involutions with no fixed points, $J_n$, in the symmetric group. Our results are motivated by F. Brenti's conjecture which states that…
The convex transform order is one way to make precise comparison between the skewness of probability distributions on the real line. We establish a simple and complete characterisation of when one Beta distribution is smaller than another…
We present a bijection between cyclic permutations of {1,2,...,n+1} and permutations of {1,2,...,n} that preserves the descent set of the first n entries and the set of weak excedances. This non-trivial bijection involves a Foata-like…
In this short note, we describe the so-called homogeneous involution on finite-dimensional graded-division algebra over an algebraically closed field. We also compute their graded polynomial identities with involution. As pointed out by L.…
Reconstructing the tree of life from molecular sequences is a fundamental problem in computational biology. Modern data sets often contain a large number of genes, which can complicate the reconstruction problem due to the fact that…
We provide a bijection between the set of factorizations, that is, ordered (n-1)-tuples of transpositions in ${\mathcal S}_{n}$ whose product is (12...n), and labelled trees on $n$ vertices. We prove a refinement of a theorem of D\'{e}nes…
A conjecture by Deutsch, Kitaev, and Remmel states that the triples of permutation statistics $(S_{10}, S_{12}, S_{17})$ and $(S_{12}, S_{10} ,S_{17})$ are equidistributed over the symmetric group $\mathfrak{S}_n$. Here, $S_{10}$ enumerates…
We prove that every tree on $n$ edges decomposes $K_{nx,nx}$ and $K_{2nx + 1}$ for all positive integers $x$. The said decompositions are obtained by proving that every tree admits a $\vec{\beta}$-labeling (oriented beta-labeling). Our…
A non-local model describing the growth of a tree-like transportation network with given allocation rules is proposed. In this model we focus on tree like networks, and the network transports the very resource it needs to build itself. Some…
The goal of this work is to decompose random populations with a genealogy in subfamilies of a given degree of kinship and to obtain a notion of infinitely divisible genealogies. We model the genealogical structure of a population by…
We generalise various theorems for finding indiscernible trees and arrays to positive logic: based on an existing modelling theorem for s-trees, we prove modelling theorems for str-trees, str$_0$-trees (the reduct of str-trees that forgets…
We introduce a model of evolving preferential attachment trees where vertices are assigned weights, and the evolution of a vertex depends not only on its own weight, but also on the weights of its neighbours. We study the distribution of…
A model of genomic sequence evolution on a species tree should include not only a sequence substitution process, but also a coalescent process, since different sites may evolve on different gene trees due to incomplete lineage sorting.…
A major task of evolutionary biology is the reconstruction of phylogenetic trees from molecular data. The evolutionary model is given by a Markov chain on a tree. Given samples from the leaves of the Markov chain, the goal is to reconstruct…
This paper constructs two involutions on tip-augmented plane trees, as defined by Donaghey, that interchange two distinct types of leaves while preserving all other leaves. These two involutions provide bijective explanations addressing a…