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Dynamics of a discrete polymer in time-dependent external potentials is studied with the master equation approach. We consider both stochastic and deterministic switching mechanisms for the potential states and give the essential equations…

Statistical Mechanics · Physics 2008-06-25 Janne Kauttonen , Juha Merikoski , Otto Pulkkinen

We study the dynamics of a polymer that is pulled by a constant force through a viscoelastic medium. This is a model for a polymer being pulled through a cell by an external force, or for an active biopolymer moving due to a self generated…

Soft Condensed Matter · Physics 2015-06-22 Hans Vandebroek , Carlo Vanderzande

Spatial non-uniformity in tight-binding models serves as a source of rich phenomena. In this paper, we study a diamond-chain tight-binding model with a spatially-modulated magnetic flux at each plaquette. In the numerical studies with…

Mesoscale and Nanoscale Physics · Physics 2023-08-09 Tomonari Mizoguchi , Yoshihito Kuno , Yasuhiro Hatsugai

For various polymers with different topological structures we numerically evaluate the mean-square radius of gyration and the hydrodynamic radius systematically through simulation. We call polymers with nontrivial topology topological…

Soft Condensed Matter · Physics 2016-11-23 Erica Uehara , Tetsuo Deguchi

The screening of hydrodynamic interactions (HI) essentially affects macroscopic properties of polymeric solutions. This screening depends not only on the polymer concentration but has a dynamic nature. In the present work, a bead-spring…

Soft Condensed Matter · Physics 2011-11-10 V. Lisy , J. Tothova , B. Brutovsky

Stellar winds are an integral part of the underlying dynamo, the motor of stellar activity. The wind controls the star's angular momentum loss, which depends on the magnetic field geometry which varies significantly in time and latitude.…

Solar and Stellar Astrophysics · Physics 2021-03-16 P. Jakab , A. Brandenburg

Rigid macromolecules or polymer chains with persistence length on the order of the contour length (or greater) have traditionally been modelled as rods or very stiff springs. The FENE-Fraenkel-spring dumbbell, which is finitely extensible…

Soft Condensed Matter · Physics 2021-07-16 I. Pincus , A. Rodger , J. Ravi Prakash

The equilibrium properties of polymer droplets on a soft deformable surface are investigated by molecular dynamics simulations of a bead-spring model. The surface consists of a polymer brush with irreversibly end-tethered linear homopolymer…

Soft Condensed Matter · Physics 2015-05-28 Fabien Léonforte , Marcus Müller

Recent spectro-polarimetric observations of solar-type stars have shown the presence of photospheric magnetic fields with a predominant toroidal component. If the external field is assumed to be current-free it is impossible to explain…

Solar and Stellar Astrophysics · Physics 2016-12-21 Alfio Bonanno

Using the Gaussian Ansatz for the monomer-monomer correlation functions we derive a set of the self-consistent equations for determination of the conformational state in the bead-and-spring copolymer model. The latter is based on the…

Soft Condensed Matter · Physics 2007-05-23 Yu. A. Kuznetsov , E. G. Timoshenko

Stellar radiative zones are typically assumed to be motionless in standard models of stellar structure but there is sound theoretical and observational evidence that this cannot be the case. We investigate by direct numerical simulations a…

Fluid Dynamics · Physics 2018-07-18 Radostin D. Simitev , Friedrich H. Busse

We extend the Rouse model of polymer dynamics to situations of non-stationary chain growth. For a dragged polymer chain of length $N(t) = t^\alpha$, we find two transitions in conformational dynamics. At $\alpha= 1/2$, the propagation of…

Soft Condensed Matter · Physics 2016-07-25 Ali Malek , Reiner Kree

Observations of chromospheric and coronal emissions from various solar-type stars show that the stellar magnetic activity varies with the rotation rates of the stars. The faster the star rotates, its magnetic activity gets stronger but…

Solar and Stellar Astrophysics · Physics 2019-10-16 Gopal Hazra , Jie Jiang , Bidya Binay Karak , Leonid Kitchatinov

Traditional models of wormlike chains in shear flows at finite temperature approximate the equation of motion via finite difference discretization (bead and rod models). We introduce here a new method based on a spectral representation in…

Soft Condensed Matter · Physics 2007-05-23 Chris H. Wiggins , Alberto Montesi , Matteo Pasquali

We analyze structural and conformational properties in a simulated bead-spring model of a non-entangled, supercooled polymer melt. We explore the statics of the model via various structure factors, involving not only the monomers, but also…

Soft Condensed Matter · Physics 2009-11-10 Martin Aichele , Song-Ho Chong , Jörg Baschnagel , Matthias Fuchs

We investigate the conformational properties of a multi-branched polymer structure with a dendrimer-like topology, known as a snowflake polymer. This polymer is characterized by two parameters: $f_s$, which represents the functionality of…

Soft Condensed Matter · Physics 2023-06-26 Khristine Haydukivska , Viktoria Blavatska , Jaroslaw Paturej

The linear viscoelastic response of single semiflexible polymer chains in the infinite-dilution limit is studied using Brownian dynamics simulations of coarse-grained bead-spring chains. The springs obey the FENE-Fraenkel force law, a…

Soft Condensed Matter · Physics 2026-03-03 Amit Varakhedkar , P. Sunthar , J. Ravi Prakash

We investigate conformations and dynamics of a polymer considering its monomers to be active Brownian particles. This active polymer shows very intriguing physical behavior which is absent in an active Rouse chain. The chain initially…

Soft Condensed Matter · Physics 2020-04-13 Shalabh K. Anand , Sunil P. Singh

The conformational and dynamical properties of active self-propelled filaments/polymers are investigated in the presence of hydrodynamic interactions by both, Brownian dynamics simulations and analytical theory. Numerically, a discrete…

Soft Condensed Matter · Physics 2020-08-04 Aitor Martin-Gomez , Thomas Eisenstecken , Gerhard Gompper , Roland G. Winkler

Simulations and Mode-Coupling Theory calculations, for a large range of the arm number $f$ and packing fraction $\eta$ have shown that the structural arrest and the dynamics of star polymers in a good solvent are extremely rich: the systems…

Soft Condensed Matter · Physics 2009-11-10 F. Lo Verso , L. Reatto , G. Foffi , P. Tartaglia , K. A. Dawson