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Advances in large language models (LLMs) have spurred research into enhancing their reasoning capabilities, particularly in math-rich STEM (Science, Technology, Engineering, and Mathematics) documents. While LLMs can generate equations or…

Computation and Language · Computer Science 2025-06-03 Jiaru Zou , Qing Wang , Pratyush Thakur , Nickvash Kani

Monitoring machine learning (ML) systems is hard, with standard practice focusing on detecting distribution shifts rather than their causes. Root-cause analysis often relies on manual tracing to determine whether a shift is caused by…

Software Engineering · Computer Science 2025-10-28 Joran Leest , Ilias Gerostathopoulos , Patricia Lago , Claudia Raibulet

Foundation models, such as large language models (LLMs), have the potential to streamline evaluation workflows and improve their performance. However, practical adoption faces challenges, such as customisability, accuracy, and scalability.…

Information Retrieval · Computer Science 2025-11-11 Hao Zhang , Qinghua Lu , Liming Zhu

We call on the Document AI (DocAI) community to reevaluate current methodologies and embrace the challenge of creating more practically-oriented benchmarks. Document Understanding Dataset and Evaluation (DUDE) seeks to remediate the halted…

This chapter presents an introduction to Markovian modeling for the analysis of sequence data. Contrary to the deterministic approach seen in the previous sequence analysis chapters, Markovian models are probabilistic models, focusing on…

Methodology · Statistics 2023-09-18 Jouni Helske , Satu Helske , Mohammed Saqr , Sonsoles López-Pernas , Keefe Murphy

Scientific data visualization plays a crucial role in research by enabling the direct display of complex information and assisting researchers in identifying implicit patterns. Despite its importance, the use of Large Language Models (LLMs)…

Computation and Language · Computer Science 2024-03-20 Zhiyu Yang , Zihan Zhou , Shuo Wang , Xin Cong , Xu Han , Yukun Yan , Zhenghao Liu , Zhixing Tan , Pengyuan Liu , Dong Yu , Zhiyuan Liu , Xiaodong Shi , Maosong Sun

Reading scientific research papers is a skill that many students do not learn before entering PhD programs, but it is critical to their success. This paper describes our diagramming technique for teaching this skill, which helps them…

Software Engineering · Computer Science 2024-05-07 Mary Shaw

Numerous knowledge workers utilize spreadsheets in business, accounting, and finance. However, a lack of systematic documentation methods for spreadsheets hinders automation, collaboration, and knowledge transfer, which risks the loss of…

Software Engineering · Computer Science 2025-10-24 Amila Indika , Igor Molybog

The article describes the automated documentation system designed to generate reports on research conducted by computer complex technical objects and systems in multi-level modeling environment {\guillemotleft}MARS{\guillemotright}. We…

Other Computer Science · Computer Science 2013-11-08 T. V. Gandzha , S. A Panov

Objective This study is part of a series of initiatives at a UK university designed to cultivate a deep understanding of students' perspectives on analytics that resonate with their unique learning needs. It explores collaborative data…

Computers and Society · Computer Science 2025-02-18 Raghda Zahran , Jianfei Xu , Huizhi Liang , Matthew Forshaw

Statistical (machine learning) tools for equation discovery require large amounts of data that are typically computer generated rather than experimentally observed. Multiscale modeling and stochastic simulations are two areas where learning…

Machine Learning · Statistics 2021-03-17 Joseph Bakarji , Daniel M. Tartakovsky

Stochastic fluid-fluid models (SFFMs) offer powerful modeling ability for a wide range of real-life systems of significance. The existing theoretical framework for this class of models is in terms of operator-analytic methods. For the first…

Probability · Mathematics 2022-03-01 Nigel G. Bean , Małgorzata M. O'Reilly , Zbigniew Palmowski

Platforms such as Stack Overflow are available for software practitioners to solicit solutions to their challenges and knowledge needs. The practices therein have in recent times however triggered quality related concerns. This is a…

Software Engineering · Computer Science 2020-10-26 Sarah Meldrum , Sherlock A. Licorish , Bastin Tony Roy Savarimuthu

These notes provide a short, focused introduction to modelling stochastic gene expression, including a derivation of the master equation, the recovery of deterministic dynamics, birth-and-death processes, and Langevin theory. The notes were…

Quantitative Methods · Quantitative Biology 2016-07-27 Peter S Swain

Machine learning (ML) is increasingly adopted in scientific research, yet the quality and reliability of results often depend on how experiments are designed and documented. Poor baselines, inconsistent preprocessing, or insufficient…

Machine Learning · Computer Science 2025-12-01 Umberto Michelucci , Francesca Venturini

Context: The establishment of the Mining Software Repositories (MSR) data showcase conference track has encouraged researchers to provide data sets as a basis for further empirical studies. Objective: Examine the usage of data papers…

Software Engineering · Computer Science 2021-11-30 Zoe Kotti , Konstantinos Kravvaritis , Konstantina Dritsa , Diomidis Spinellis

Through digital imaging, microscopy has evolved from primarily being a means for visual observation of life at the micro- and nano-scale, to a quantitative tool with ever-increasing resolution and throughput. Artificial intelligence, deep…

Multi-document (MD) processing is crucial for LLMs to handle real-world tasks such as summarization and question-answering across large sets of documents. While LLMs have improved at processing long inputs, MD contexts still present unique…

Computation and Language · Computer Science 2025-04-30 Gabrielle Kaili-May Liu , Bowen Shi , Avi Caciularu , Idan Szpektor , Arman Cohan

An important task in machine learning (ML) research is comparing prior work, which is often performed via ML leaderboards: a tabular overview of experiments with comparable conditions (e.g., same task, dataset, and metric). However, the…

Computation and Language · Computer Science 2025-11-21 Roelien C Timmer , Yufang Hou , Stephen Wan

This handbook is a hands-on guide on how to approach text annotation tasks. It provides a gentle introduction to the topic, an overview of theoretical concepts as well as practical advice. The topics covered are mostly technical, but…