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Related papers: Sedimentation of Knotted Polymers

200 papers

We present experimental results on slow flow properties of a granular assembly confined in a vertical column and driven upwards at a constant velocity V. For monodisperse assemblies this study evidences at low velocities ($1<V<100 \mu m/s$)…

Soft Condensed Matter · Physics 2016-08-16 G. Ovarlez , E. Clément

We have evaluated a universal ratio between diffusion constants of the ring polymer with a given knot $K$ and a linear polymer with the same molecular weight in solution through the Brownian dynamics under hydrodynamic interaction. The…

Soft Condensed Matter · Physics 2009-03-25 Naoko Kanaeda , Tetsuo Deguchi

The effect of gravity on the collective motion of living microswimmers, such as bacteria and micro-algae, is pivotal to unravel not only bio-convection patterns but also the settling of bacterial biofilms on solid surfaces. In this work, we…

Soft Condensed Matter · Physics 2025-04-07 C. Miguel Barriuso G. , Horacio Serna , Ignacio Pagonabarraga , Chantal Valeriani

We study how confinement affects topology and conformations in polymer films of varying thickness $h$. The knotting probability exhibits a maximum at intermediate thicknesses near the bulk radius of gyration $h \approx R_\mathrm{g,bulk}$,…

Soft Condensed Matter · Physics 2026-05-05 Maurice P. Schmitt , Hendrik Meyer , Peter Virnau

We use a combination of original light scattering techniques and particles with unique optical properties to investigate the behavior of suspensions of attractive colloids under gravitational stress, following over time the concentration…

Soft Condensed Matter · Physics 2015-05-27 Giovanni Brambilla , Stefano Buzzaccaro , R. Piazza , Ludovic Berthier , Luca Cipelletti

Entangled networks of stiff biopolymers exhibit complex dynamic response, emerging from the topological constraints that neighboring filaments impose upon each other. We propose a class of reference models for entanglement dynamics of stiff…

Soft Condensed Matter · Physics 2008-06-23 Felix Höfling , Tobias Munk , Erwin Frey , Thomas Franosch

We study the sedimentation of finite-size inertial particles in a Rayleigh-Taylor-like setup using state-of-the-art direct numerical simulations. The falling particles are observed to produce two distinct regions: a leading mixing layer…

Fluid Dynamics · Physics 2026-01-28 Simone Tandurella , Marco Edoardo Rosti , Stefano Musacchio , Guido Boffetta

Particles whose shapes couple translation to rotation display a rich array of behaviors as they sediment at low Reynolds number. We introduce a unifying perspective in which the possible dynamical regimes and bifurcations between them can…

Semiflexible polymers are widely used as a paradigm for understanding structural phases in biomolecules including folding of proteins. Here, we compare bead-spring and bead-stick variants of coarse-grained semiflexible polymer models that…

Soft Condensed Matter · Physics 2024-02-16 Wolfhard Janke , Suman Majumder , Martin Marenz , Subhajit Paul

Particle sedimentation in the vicinity of a fixed horizontal vortex with time-dependent intensity can be chaotic, provided gravity is sufficient to displace the particle cloud while the vortex is off or weak. This "stretch, sediment and…

Fluid Dynamics · Physics 2010-03-23 J. R. Angilella

Characteristics of relaxed density profile and conformation of polymer chains are studied by a Monte Carlo simulation on a discrete lattice in three dimensions using different segmental (kink-jump $K$, crank-shaft $C$, reptation $R$)…

Soft Condensed Matter · Physics 2007-05-23 Frank W. Bentrem , Jun Xie , R. B. Pandey

We examine the dynamics of small anisotropic particles (spheroids) sedimenting through homogeneous isotropic turbulence using direct numerical simulations and theory. The gravity-induced inertial torque acting on sub-Kolmogorov spheroids…

Atmospheric and Oceanic Physics · Physics 2020-07-22 Prateek Anand , Samriddhi Sankar Ray , Ganesh Subramanian

We investigate the behavior of the slip length in Newtonian liquids subject to planar shear bounded by substrates with mixed boundary conditions. The upper wall, consisting of a homogenous surface of finite or vanishing slip, moves at a…

Soft Condensed Matter · Physics 2009-11-10 Nikolai V. Priezjev , Anton A. Darhuber , Sandra M. Troian

Several nontrivial properties are shown for the mean square radius of gyration $R_K^2$ of ring polymers with a fixed knot type K. Through computer simulation, we discuss both finite-size and asymptotic behaviors of the gyration radius under…

Soft Condensed Matter · Physics 2009-11-07 Miyuki K. Shimamura , Tetsuo Deguchi

The sedimentation process in a suspension of bacteria is the result of the competition between gravity and the intrinsic motion of the microorganisms. We perform simulations of run-and-tumble "squirmers" that move in a fluid medium,…

Soft Condensed Matter · Physics 2021-11-11 Andrea Scagliarini , Ignacio Pagonabarraga

We investigate the statistical mechanics of a torsionally constrained polymer. The polymer is modeled as a fluctuating rod with bend stiffness A kT and twist stiffness C kT. In such a model, thermal bend fluctuations couple geometrically to…

Soft Condensed Matter · Physics 2009-10-30 J. David Moroz , Philip Nelson

We study crystal nucleation under the influence of sedimentation in a model of colloidal hard spheres via Brownian Dynamics simulations. We introduce two external fields acting on the colloidal fluid: a uniform gravitational field (body…

Soft Condensed Matter · Physics 2013-07-03 John Russo , Anthony C. Maggs , Daniel Bonn , Hajime Tanaka

The gravity-driven motion of rigid particles in a viscous fluid is relevant in many natural and industrial processes, yet this has mainly been investigated for spherical particles. We therefore consider the sedimentation of non-spherical…

Fluid Dynamics · Physics 2021-02-23 Mehdi Niazi Ardekani , Pedro Costa , Wim-Paul Breugem , Luca Brandt

Microorganisms thrive in complex environments and their behavior in fluids holds significant importance for various medical and industrial applications. By conducting Lattice Boltzmann simulations, the transport and rotational properties of…

Soft Condensed Matter · Physics 2025-03-25 Yuan Zhou , Kai Qi , Marco De Corato , Kevin Stratford , Ignacio Pagonabarraga

We study the dynamics of a dilute solution of rigid rodlike polymers in a viscous fluid at low Reynolds number by means of numerical simulations of a simple rheological model. We show that the rotational dynamics of polymers destabilizes…

Fluid Dynamics · Physics 2022-11-11 Leonardo Puggioni , Guido Boffetta , Stefano Musacchio