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Attributing model behavior to training data is an evolving research field. A common benchmark is data removal, which involves eliminating data instances with either low or high values, then assessing a model's performance trained on the…

Artificial Intelligence · Computer Science 2026-05-13 Danilo Brajovic , David A. Kreplin , Marco F. Huber

This study explores three approaches to processing table data in scientific papers to enhance extractive question answering and develop a software tool for the systematic review process. The methods evaluated include: (1) Optical Character…

Information Retrieval · Computer Science 2025-08-27 Dongyoun Kim , Hyung-do Choi , Youngsun Jang , John Kim

While results visualization is a critical phase to the communication of new academic results, plots are frequently shared without the complete combination of code, input data, execution context and outputs required to independently…

Software Engineering · Computer Science 2026-03-24 Gabriele Padovani , Sandro Fiore

Increasing data volumes from scientific simulations and instruments (supercomputers, accelerators, telescopes) often exceed network, storage, and analysis capabilities. The scientific community's response to this challenge is scientific…

We present a new video storage system (VSS) designed to decouple high-level video operations from the low-level details required to store and efficiently retrieve video data. VSS is designed to be the storage subsystem of a video data…

Databases · Computer Science 2021-04-01 Brandon Haynes , Maureen Daum , Dong He , Amrita Mazumdar , Magdalena Balazinska , Alvin Cheung , Luis Ceze

In this paper, we introduce a scientific format for text-based data files, which facilitates storing and communicating tabular data sets. The so-called Full-Metadata Format builds on the widely used INI-standard and is based on four…

Scientific Computing relies on executing computer algorithms coded in some programming languages. Given a particular available hardware, algorithms speed is a crucial factor. There are many scientific computing environments used to code…

Machine Learning · Computer Science 2019-08-15 Ahmed A. Elsayed , Waleed A. Yousef

The Simulation Environment for Atomistic and Molecular Modeling (SEAMM) is an open-source software package written in Python that provides a graphical interface for setting up, executing, and analyzing molecular and materials simulations.…

We propose CFS, a distributed file system for large scale container platforms. CFS supports both sequential and random file accesses with optimized storage for both large files and small files, and adopts different replication protocols for…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-11-11 Haifeng Liu , Wei Ding , Yuan Chen , Weilong Guo , Shuoran Liu , Tianpeng Li , Mofei Zhang , Jianxing Zhao , Hongyin Zhu , Zhengyi Zhu

Computational Workflows are widely used in data analysis, enabling innovation and decision-making. In many domains (bioinformatics, image analysis, & radio astronomy) the analysis components are numerous and written in multiple different…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-05-24 Michael R. Crusoe , Sanne Abeln , Alexandru Iosup , Peter Amstutz , John Chilton , Nebojša Tijanić , Hervé Ménager , Stian Soiland-Reyes , Bogdan Gavrilovic , Carole Goble

Databases, collections of related data, are as old as the written word. A database can be anything from a homemaker's metal recipe file to a sophisticated data warehouse. Yet today, when we think of a database we invariably think of…

Databases · Computer Science 2007-05-23 Nancy Hartline Bercich

Despite the importance of sparse matrices in numerous fields of science, software implementations remain difficult to use for non-expert users, generally requiring the understanding of underlying details of the chosen sparse matrix storage…

Mathematical Software · Computer Science 2019-07-23 Conrad Sanderson , Ryan Curtin

Rgtsvm provides a fast and flexible support vector machine (SVM) implementation for the R language. The distinguishing feature of Rgtsvm is that support vector classification and support vector regression tasks are implemented on a…

Machine Learning · Statistics 2017-06-20 Zhong Wang , Tinyi Chu , Lauren A Choate , Charles G Danko

The CIWS-FW is aimed at providing a common and standard solution for the storage, processing and quick look at the data acquired from scientific instruments for astrophysics. The target system is the instrument workstation either in the…

The paper proposes an approach to transcend multicultural and multilingual barriers in the use and reuse of geographical data at the European level. The approach aims at sharing scientific terms in the field of nature conservation with the…

Digital Libraries · Computer Science 2011-07-11 Monica De Martino , Riccardo Albertoni

Nowadays, many decision support applications need to exploit data that are not only numerical or symbolic, but also multimedia, multistructure, multisource, multimodal, and/or multiversion. We term such data complex data. Managing and…

Databases · Computer Science 2007-07-12 Jérôme Darmont , Omar Boussaid , Jean-Christian Ralaivao , Kamel Aouiche

In order to allow different software applications, in constant evolution, to interact and exchange data, flexible file formats are needed. A file format specification for different types of content has been elaborated to allow communication…

Digital Libraries · Computer Science 2008-05-05 X. Gonze , C. -O. Almbladh , A. Cucca , D. Caliste , C. Freysoldt , M. A. L. Marques , V. Olevano , Y. Pouillon , M. J. Verstraete

Large systems biology projects can encompass several workgroups often located in different countries. An overview about existing data standards in systems biology and the management, storage, exchange and integration of the generated data…

Databases · Computer Science 2009-12-15 Gerhard Mayer

Considering the challenges posed by the space and time complexities in handling extensive scientific volumetric data, various data representations have been developed for the analysis of large-scale scientific data. Multivariate functional…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-12-27 Jianxin Sun , David Lenz , Hongfeng Yu , Tom Peterka

Robust support vector machine (RSVM) has been shown to perform remarkably well to improve the generalization performance of support vector machine under the noisy environment. Unfortunately, in order to handle the non-convexity induced by…

Machine Learning · Computer Science 2019-12-25 Zhou Zhai , Bin Gu , Xiang Li , Heng Huang