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The evolution of multicellular organisms from monocellular ancestors represents one of the greatest advances of the history of life. The assembly of such multicellular organisms requires signalling and response between cells: over millions…

Cell Behavior · Quantitative Biology 2007-05-23 Graeme J. Ackland , Richard D. L. Hanes , Morrel H. Cohen

We study topological and geometric properties of a cell growth process in the Euclidean plane, where the cells are regular pentagons. To explore the aesthetic aspects of this model, we employ a laser cutter on various materials to create…

Geometric Topology · Mathematics 2024-03-20 Claudia Silva , Erika Roldan , Rosemberg Toala-Enriquez

Teams of cooperating sperm have been found across several vertebrate and invertebrate species, ranging from sperm pairs to massive aggregates containing hundreds of cells. Although the biochemical mechanisms involved in the aggregation…

Biological Physics · Physics 2018-05-31 D. J. G. Pearce , L. A. Hoogerbrugge , K. A. Hook , H. S. Fisher , L. Giomi

For one-dimensional growth processes we consider the distribution of the height above a given point of the substrate and study its scale invariance in the limit of large times. We argue that for self-similar growth from a single seed the…

Statistical Mechanics · Physics 2009-10-31 Michael Praehofer , Herbert Spohn

During the development of an organism, cells must coordinate and organize to generate the correct shape, structure, and spatial patterns of tissues and organs, a process known as morphogenesis. The morphogenesis of embryonic tissues is…

Tissues and Organs · Quantitative Biology 2026-04-28 Adrian Aguirre-Tamaral , Elisa Floris , Bernat Corominas-Murtra

A model of pattern formation in living systems is presented. The pattern is achieved by the sequential interaction of two signaling pathways. The coupling of the pattern to the (thick) epithelial sheet changes is given, when the Gauss…

Tissues and Organs · Quantitative Biology 2009-05-11 Frederick W. Cummings

Voronoi tessellations of scale-invariant fractal sets are characterized by topological and metrical properties that are significantly different from those of natural cellular structures. As an example we analyze Voronoi diagrams of…

Statistical Mechanics · Physics 2009-10-31 Haye Hinrichsen , Gudrun Schliecker

Plants frequently contain numerous organs, organized in 3D branching systems defining the plant's architecture. Reconstructing the architecture of plants from unstructured observations is challenging because of self-occlusion and spatial…

Computer Vision and Pattern Recognition · Computer Science 2026-04-02 Samara Ghrer , Christophe Godin , Stefanie Wuhrer

Plant morphogenesis relies on dynamic growth deformations at the cell and tissue scales driven by osmotic fluxes. A mechanistic understanding of this phenomenon demands a physical framework that integrates cell imbibition, tissue mechanics,…

Biological Physics · Physics 2025-12-08 Hadrien Oliveri , Christophe Godin , Ibrahim Cheddadi

The cambium is a meristematic tissue in plant stems. Here, cell divisions occur that are required for radial growth of plant stems. Daughters of cell divisions within the cambium differentiate into woody xylem cells towards the inside of…

Cell Behavior · Quantitative Biology 2025-02-17 K. S. Bagdassarian , J. P. Etchells , N. S. Savage

The growth of plants is a hydromechanical phenomenon in which cells enlarge by absorbing water, while their walls expand and remodel under turgor-induced tension. In multicellular tissues, where cells are mechanically interconnected,…

Biological Physics · Physics 2025-09-09 Hadrien Oliveri , Ibrahim Cheddadi

Poisson Voronoi tessellations have been used in modeling many types of systems across different sciences, from geography and astronomy to telecommunications. The existing literature on the statistical properties of Poisson Voronoi cells is…

Networking and Internet Architecture · Computer Science 2020-09-09 Konstantinos Koufos , Carl P. Dettmann

Ecological selection forces for weedy and domesticated traits have influenced the evolution of seed shape in Setaria resulting in similarity in seed shape that reflects similarity in ecological function rather than reflecting phylogenetic…

Populations and Evolution · Quantitative Biology 2014-03-28 J. L. Donnelly , D. C. Adams , J. Dekker

In this paper, we analyse a model for the growth of three-dimensional walled cells. In this model the biomechanical expansion of the cell is coupled with the geometry of its wall. We consider that the density of building material depends on…

Analysis of PDEs · Mathematics 2015-02-20 Vincent Calvez , Laetitia Giraldi

Self-assembly at submicroscopic scales is an important but little understood phenomenon. A prominent example is virus capsid growth, whose underlying behavior can be modeled using simple particles that assemble into polyhedral shells.…

Soft Condensed Matter · Physics 2008-10-28 D. C. Rapaport

The study of organoids, artificially grown cell aggregates with the functionality and small-scale anatomy of real organs, is one of the most active areas of research in biology and biophysics, yet the basic physical origins of their…

Biological Physics · Physics 2021-10-12 Jan Rozman , Matej Krajnc , Primož Ziherl

Plant morphology emerges from cellular growth and structure. The turgor-driven diffuse growth of a cell can be highly anisotropic: significant longitudinally and negligible radially. Such anisotropy is ensured by cellulose microfibrils…

Quantitative Methods · Quantitative Biology 2022-08-23 Jeevanjyoti Chakraborty , Jingxi Luo , Rosemary J Dyson

Self-closing assembly is prone to polymorphism due to thermally-excited bending fluctuations, which permit the formation of off-target assemblies at the point of self-closure. One way to overcome this source of polymorphism is to use…

Soft Condensed Matter · Physics 2025-11-06 Sirui Liu , Thomas E. Videbæk , W. Benjamin Rogers

We present an approach to leaf level segmentation of images of Arabidopsis thaliana plants based upon detected edges. We introduce a novel approach to edge classification, which forms an important part of a method to both count the leaves…

Computer Vision and Pattern Recognition · Computer Science 2019-04-08 Jonathan Bell , Hannah M. Dee

In this paper we consider a random partition of the plane into cells, the partition being based on the nodes and links of a {\it random planar geometric graph}. The resulting structure generalises the \emph{random \tes}\ hitherto studied in…

Probability · Mathematics 2016-06-07 Richard Cowan , Albert K. L. Tsang