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The ALICE (A Large Ion Collider Experiment) detector yields a huge sample of data from different sub-detectors. On-line data processing is applied to select and reduce the volume of the stored data. ALICE applies a multi-level hardware…

Instrumentation and Detectors · Physics 2019-08-14 F. Ronchetti , F. Blanco , M. Figueredo , A. G. Knospe , L. Xaplanteris

Hematoxylin and Eosin (H&E) staining is a cornerstone of pathological analysis, offering reliable visualization of cellular morphology and tissue architecture for cancer diagnosis, subtyping, and grading. Immunohistochemistry (IHC) staining…

Image and Video Processing · Electrical Eng. & Systems 2025-06-23 Amit Das , Naofumi Tomita , Kyle J. Syme , Weijie Ma , Paige O'Connor , Kristin N. Corbett , Bing Ren , Xiaoying Liu , Saeed Hassanpour

Pathological features are the gold standard for tumor diagnosis, guiding treatment and prognosis. However, standard histopathological process is labor-intensive and time-consuming, while frozen sections have lower accuracy. Dynamic…

Breast cancer presents a significant healthcare challenge globally, demanding precise diagnostics and effective treatment strategies, where histopathological examination of Hematoxylin and Eosin (H&E) stained tissue sections plays a central…

Image and Video Processing · Electrical Eng. & Systems 2024-08-06 Linhao Qu , Chengsheng Zhang , Guihui Li , Haiyong Zheng , Chen Peng , Wei He

Early diagnosis of the cancer cells is necessary for making an effective treatment plan and for the health and safety of a patient. Nowadays, doctors usually use a histological grade that pathologists determine by performing a…

Computer Vision and Pattern Recognition · Computer Science 2023-11-15 Varan Singh Rohila , Neeraj Lalwani , Lochan Basyal

Histological Tertiary Lymphoid Structures (TLSs) are increasingly recognized for their correlation with the efficacy of immunotherapy in various solid tumors. Traditionally, the identification and characterization of TLSs rely on…

Image and Video Processing · Electrical Eng. & Systems 2024-08-27 Qiuli Wang , Yongxu Liu , Li Ma , Xianqi Wang , Wei Chen , Xiaohong Yao

When irradiated with violet light, hexaazatrinaphthylene (HATN) extracts a hydrogen atom from an alcohol forming a long-living hydrogenated species. The apparent kinetic isotope effect for fluorescence decay time in deuterated methanol…

Chemical Physics · Physics 2022-05-30 Olaf Morawski , Paweł Gawryś , Jarosław Sadło , Andrzej L. Sobolewski

Photonic biosensors that use optical resonances to amplify signals from refractive index changes offer high-sensitivity, real-time readout, and scalable, low-cost fabrication. However, when used with classic affinity assays they struggle…

Applied Physics · Physics 2021-02-10 Michael Dubrovsky , Morgan Blevins , Svetlana V. Boriskina , Diedrik Vermeulen

Background: The aim of this study is to use bioinformatics to discover the biomarkers associated with patients with Pancreatic Ductal Adenocarcinoma(PDAC). Material and Methods: GSE28735, GSE15471, and GSE62452 are gene microarray datasets…

Molecular Networks · Quantitative Biology 2023-03-28 Atefeh Akbarnia Dafrazi , Tahmineh Mehrabi , Fatemeh Malekinejad

Histopathologists establish cancer grade by assessing histological structures, such as glands in prostate cancer. Yet, digital pathology pipelines often rely on grid-based tiling that ignores tissue architecture. This introduces irrelevant…

We describe a modification of the TAP method for purification and analysis of multiprotein complexes, termed here DEF-TAP (for Differential Elution Fractionation after Tandem Affinity Purification). Its essential new feature is the use for…

Molecular Networks · Quantitative Biology 2009-11-02 Evelyne Saade , Undine Mechold , Arman Kulyyassov , Damien Vertut , Marc Lipinski , Vasily Ogryzko

Accurate histological differentiation between adenocarcinoma (ADC) and squamous cell carcinoma (SCC) is critical for personalized treatment in non-small cell lung cancer (NSCLC). While [$^{18}$F]FDG PET/CT is a standard tool for the…

Computer Vision and Pattern Recognition · Computer Science 2026-05-05 Fatih Aksu , Laura Ciuffetti , Francesco Di Feola , Filippo Ruffini , Giulia Romoli , Fabrizia Gelardi , Arturo Chiti , Valerio Guarrasi , Paolo Soda

Breast cancer is one of the most serious types of cancer that can occur in women. The automatic diagnosis of breast cancer by analyzing histological images (HIs) is important for patients and their prognosis. The classification of HIs…

Image and Video Processing · Electrical Eng. & Systems 2022-08-02 Hayder A. Khikani , Naira Elazab , Ahmed Elgarayhi , Mohammed Elmogy , Mohammed Sallah

The HICAT project is a Heavy Ion accelerator for light ion Cancer Treatment to be built for the clinics in Heidelberg, Germany. It consists of a 7 MeV/u linac, a compact synchrotron and three treatment places, one of them equipped with a…

Accelerator Physics · Physics 2007-05-23 Ralph C. Baer , Hartmut Eickhoff , Thomas Haberer

A distinct feature of pancreatic ductal adenocarcinoma (PDAC) is a prominent tumor microenvironment (TME) with remarkable cellular and spatial heterogeneity that meaningfully impacts disease biology and treatment resistance. The dynamic…

Accurate prediction of Drug-Target Affinity (DTA) is crucial for reducing experimental costs and accelerating early screening in computational drug discovery. While sequence-based deep learning methods avoid reliance on costly 3D…

Machine Learning · Computer Science 2025-11-03 Minghui Li , Yuanhang Wang , Peijin Guo , Wei Wan , Shengshan Hu , Shengqing Hu

Hydrogen bonds and other non-covalent interactions play a crucial role in maintaining the structural integrity and functionality of biological macromolecules such as proteins and nucleic acids. Accurate identification and analysis of these…

Chemical Physics · Physics 2026-02-23 Abhishek Tiwari

Real-time deformability cytometry (RT-DC) is an established method that quantifies features like size, shape, and stiffness for whole cell populations on a single-cell level in real time. To extract the cell stiffness, a lookup table (LUT)…

Quantitative Methods · Quantitative Biology 2022-08-29 Lucas Daniel Wittwer , Felix Reichel , Paul Müller , Jochen Guck , Sebastian Aland

Histamine is a critical mediator of IgE/ cell-mediated anaphylaxis, a neurotransmitter and a regulator of gastric acid secretion. Histamine is a monoamine synthesized from the amino acid histidine through a reaction catalyzed by the enzyme…

Molecular Networks · Quantitative Biology 2018-06-04 Hua Huang , Yapeng Li , Jinyi Liang , Fred D. Finkelman

With the advent of 6G networks, offering ultra-high bandwidth and ultra-low latency, coupled with the enhancement of terminal device resolutions, holographic communication is gradually becoming a reality. Holographic digital twin (HDT) is…

Multimedia · Computer Science 2025-02-20 Haijun Zhang , Ziyang Zhang , Xiangnan Liu , Wei Li , Haojin Li , Chen Sun