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The recently developed matrix based Renyi's entropy enables measurement of information in data simply using the eigenspectrum of symmetric positive semi definite (PSD) matrices in reproducing kernel Hilbert space, without estimation of the…

Machine Learning · Statistics 2023-01-10 Tieliang Gong , Yuxin Dong , Shujian Yu , Bo Dong

The rise of data-intensive applications exposed the limitations of conventional processor-centric von-Neumann architectures that struggle to meet the off-chip memory bandwidth demand. Therefore, recent innovations in computer architecture…

Hardware Architecture · Computer Science 2024-05-28 Asif Ali Khan , Hamid Farzaneh , Karl F. A. Friebel , Clément Fournier , Lorenzo Chelini , Jeronimo Castrillon

Learned indexes, which use machine learning models to replace traditional index structures, have shown promising results in recent studies. However, existing learned indexes exhibit a performance gap between synthetic and real-world…

Databases · Computer Science 2022-05-20 Jiaoyi Zhang , Yihan Gao

Processing high-throughput DNA sequencing data of individuals or populations requires stringing together independent software tools with many parameters, often leading to non-reproducible pipelines and datasets. We developed grenepipe to…

Genomics · Quantitative Biology 2025-01-09 Lucas Czech , Moises Exposito-Alonso

Checkpoint/restart (C/R) provides fault-tolerant computing capability, enables long running applications, and provides scheduling flexibility for computing centers to support diverse workloads with different priority. It is therefore vital…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-03-17 Prashant Singh Chouhan , Harsh Khetawat , Neil Resnik , Twinkle Jain , Rohan Garg , Gene Cooperman , Rebecca Hartman-Baker , Zhengji Zhao

The Adapteva Epiphany many-core architecture comprises a scalable 2D mesh Network-on-Chip (NoC) of low-power RISC cores with minimal uncore functionality. Whereas such a processor offers high computational energy efficiency and parallel…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-04-28 David Richie , James Ross , Jamie Infantolino

The Intel Xeon Phi manycore processor is designed to provide high performance matrix computations of the type often performed in data analysis. Common data analysis environments include Matlab, GNU Octave, Julia, Python, and R. Achieving…

Analog in-memory computing (AIMC) cores offers significant performance and energy benefits for neural network inference with respect to digital logic (e.g., CPUs). AIMCs accelerate matrix-vector multiplications, which dominate these…

Data management systems have traditionally been designed to support either long-running analytics queries or short-lived transactions, but an increasing number of applications need both. For example, online games, socio-mobile apps, and…

Databases · Computer Science 2012-05-31 Benjamin Sowell , Wojciech Golab , Mehul A. Shah

As computational paradigms evolve, applications such as attention-based models, wireless telecommunications, and computer vision impose increasingly challenging requirements on computer architectures: significant memory footprints and…

Hardware Architecture · Computer Science 2025-04-08 Sergio Mazzola , Yichao Zhang , Marco Bertuletti , Diyou Shen , Luca Benini

The emergence of R, a freely available data analysis environment, brought to the researcher in any science field a set of well-concerted instruments of immense power and low cost. In botany and zoology, these instruments could be used, for…

Quantitative Methods · Quantitative Biology 2020-02-06 Alexey Shipunov

Measuring Mutual Information (MI) between high-dimensional, continuous, random variables from observed samples has wide theoretical and practical applications. Recent work, MINE (Belghazi et al. 2018), focused on estimating tight…

Machine Learning · Computer Science 2019-05-28 Xiao Lin , Indranil Sur , Samuel A. Nastase , Ajay Divakaran , Uri Hasson , Mohamed R. Amer

As data are generated more and more from multiple disparate sources, multiview data sets, where each sample has features in distinct views, have ballooned in recent years. However, no comprehensive package exists that enables…

Serving large language models (LLMs) efficiently remains challenging due to the high memory and latency overhead of key-value (KV) cache access during autoregressive decoding. We present \textbf{TinyServe}, a lightweight and extensible…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-09-17 Dong Liu , Yanxuan Yu

The rapid growth of AI-generated content (AIGC) has enabled high-quality creative production across diverse domains, yet existing systems face critical inefficiencies in throughput, resource utilization, and scalability under concurrent…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-01-29 June Chen , Neal Xu , Gragas Huang , Bok Zhou , Stephen Liu

The Message-Passing Interface (MPI) and C++ form the backbone of high-performance computing, but MPI only provides C and Fortran bindings. While this offers great language interoperability, high-level programming languages like C++ make…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-11-13 Tim Niklas Uhl , Matthias Schimek , Lukas Hübner , Demian Hespe , Florian Kurpicz , Christoph Stelz , Peter Sanders

Image matching for both cross-view and cross-modality plays a critical role in multimodal perception. In practice, the modality gap caused by different imaging systems/styles poses great challenges to the matching task. Existing works try…

Computer Vision and Pattern Recognition · Computer Science 2025-04-01 Jiangwei Ren , Xingyu Jiang , Zizhuo Li , Dingkang Liang , Xin Zhou , Xiang Bai

We present PINNACLE, an open-source computational framework for physics-informed neural networks (PINNs) that integrates modern training strategies, multi-GPU acceleration, and hybrid quantum-classical architectures within a unified modular…

Machine Learning · Computer Science 2026-04-20 Shimon Pisnoy , Hemanth Chandravamsi , Ziv Chen , Aaron Goldgewert , Gal Shaviner , Boris Shragner , Steven H. Frankel

mlpy is a Python Open Source Machine Learning library built on top of NumPy/SciPy and the GNU Scientific Libraries. mlpy provides a wide range of state-of-the-art machine learning methods for supervised and unsupervised problems and it is…

Mathematical Software · Computer Science 2012-03-02 Davide Albanese , Roberto Visintainer , Stefano Merler , Samantha Riccadonna , Giuseppe Jurman , Cesare Furlanello

In recent years, there has been increasing interest in network diffusion models and related problems. The most popular of these are the independent cascade and linear threshold models. Much of the recent experimental work done on these…

Social and Information Networks · Computer Science 2024-04-29 Eliot W. Robson , Dhemath Reddy , Abhishek K. Umrawal