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We study an individual-based stochastic SIR epidemic model with infection-age dependent infectivity on a large random graph, capturing individual heterogeneity and non-homogeneous connectivity. Each individual is associated with particular…

Probability · Mathematics 2026-02-11 Guodong Pang , Étienne Pardoux , Aurélien Velleret

We study numerically how the structures of distinct networks influence the epidemic dynamics in contact process. We first find that the variability difference between homogeneous and heterogeneous networks is very narrow, although the…

Physics and Society · Physics 2012-04-04 Kai Gong , Ming Tang , Hui Yang , Mingsheng Shang

The dynamics of contact networks and epidemics of infectious diseases often occur on comparable time scales. Ignoring one of these time scales may provide an incomplete understanding of the population dynamics of the infection process. We…

Populations and Evolution · Quantitative Biology 2021-02-09 Luis E C Rocha , Naoki Masuda

We predict the future course of ongoing susceptible-infected-susceptible (SIS) epidemics on regular, Erd\H{o}s-R\'{e}nyi and Barab\'asi-Albert networks. It is known that the contact network influences the spread of an epidemic within a…

Populations and Evolution · Quantitative Biology 2021-11-11 Tanja Zerenner , Francesco Di Lauro , Masoumeh Dashti , Luc Berthouze , Istvan Z. Kiss

Many progresses in the understanding of epidemic spreading models have been obtained thanks to numerous modeling efforts and analytical and numerical studies, considering host populations with very different structures and properties,…

Physics and Society · Physics 2018-02-02 Antoine Moinet , Alain Barrat , Romualdo Pastor Satorras

The interplay of biological, social, structural and random factors makes disease forecasting extraordinarily complex. The course of an epidemic exhibits average growth dynamics determined by features of the pathogen and the population, yet…

Populations and Evolution · Quantitative Biology 2022-02-24 Andrea J. Allen , Mariah C. Boudreau , Nicholas J. Roberts , Antoine Allard , Laurent Hébert-Dufresne

Contact networks can significantly change the course of epidemics, affecting the rate of new infections and the mean size of an outbreak. Despite this dependence, some characteristics of epidemics are not contingent on the contact network…

Probability · Mathematics 2015-03-17 Alexander Gutfraind

We explore the emergence of persistent infection in a patch of population, where the disease progression of the individuals is given by the SIRS model and an individual becomes infected on contact with another infected individual. We…

Populations and Evolution · Quantitative Biology 2018-05-08 Vidit Agrawal , Promit Moitra , Sudeshna Sinha

Throughout the course of an epidemic, the rate at which disease spreads varies with behavioral changes, the emergence of new disease variants, and the introduction of mitigation policies. Estimating such changes in transmission rates can…

Methodology · Statistics 2022-11-29 Jenny Huang , Raphaël Morsomme , David Dunson , Jason Xu

Contagious processes, such as spread of infectious diseases, social behaviors, or computer viruses, affect biological, social, and technological systems. Epidemic models for large populations and finite populations on networks have been…

Optimization and Control · Mathematics 2020-04-14 Renato Pagliara , Naomi E. Leonard

We study the spreading of cooperative infections in an empirical temporal network of contacts between people, including health care workers and patients, in a hospital. The system exhibits a phase transition leading to one or several…

Physics and Society · Physics 2018-02-08 Jorge P. Rodríguez , Fakhteh Ghanbarnejad , Víctor M. Eguíluz

To simplify mathematical models of disease spread, we often assume equal contact rates among hosts, but real-world scenarios differ. Network-based frameworks help capture these complexities and structural variations in actual systems. We…

Dynamical Systems · Mathematics 2024-07-03 Saswata Das , Mohammad Hossein Samaei , Caterina Scoglio

Human contact networks are constituted by a multitude of individuals and pairwise contacts among them. However, the dynamic nature, which generates the evolution of human contact networks, of contact patterns is not known yet. Here, we…

Physics and Society · Physics 2019-05-22 Cong Li , Jing Li , Xiang Li

Some modified versions of susceptible-infected-recovered-susceptible (SIRS) model are defined on small-world networks. Latency, incubation and variable susceptibility are included, separately. Phase transitions in these models are studied.…

Statistical Mechanics · Physics 2016-08-31 H. N. Agiza , A. S. Elgazzar , S. A. Youssef

Epidemics generally spread through a succession of waves that reflect factors on multiple timescales. On short timescales, super-spreading events lead to burstiness and overdispersion, while long-term persistent heterogeneity in…

Populations and Evolution · Quantitative Biology 2022-05-04 Alexei V. Tkachenko , Sergei Maslov , Ahmed Elbanna , George N. Wong , Zachary J. Weiner , Nigel Goldenfeld

To better describe the spread of a disease, we extend a discrete time stochastic SIR-type epidemic model of Tuckwell and Williams. We assume the dependence on time of the number of daily encounters and include a parameter to represent a…

Populations and Evolution · Quantitative Biology 2022-09-30 Mireia Besalú , Giulia Binotto

The evolution of network structure and the spreading of epidemic are common coexistent dynamical processes. In most cases, network structure is treated either static or time-varying, supposing the whole network is observed in a same time…

Physics and Society · Physics 2016-03-23 Yanjun Lei , Xin Jiang , Quantong Guo , Yifang Ma , Meng Li , Zhiming Zheng

Recent empirical observations suggest a heterogeneous nature of human activities. The heavy-tailed inter-event time distribution at population level is well accepted, while whether the individual acts in a heterogeneous way is still under…

Data Analysis, Statistics and Probability · Physics 2015-05-28 Zimo Yang , Ai-Xiang Cui , Tao Zhou

We investigate what structural aspects of a collection of twelve empirical temporal networks of human contacts are important to disease spreading. We scan the entire parameter spaces of the two canonical models of infectious disease…

Populations and Evolution · Quantitative Biology 2014-05-27 Petter Holme , Fredrik Liljeros

The generation interval is the time between the infection time of an infected person and the infection time of his or her infector. Probability density functions for generation intervals have been an important input for epidemic models and…

Quantitative Methods · Quantitative Biology 2023-10-24 Eben Kenah , Marc Lipsitch , James M. Robins