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The Reverse Cuthill-McKee (RCM) algorithm is a graph-based method for reordering sparse matrices, renowned for its effectiveness in minimizing matrix bandwidth and profile. This reordering enhances the efficiency of matrix operations,…

Data Structures and Algorithms · Computer Science 2024-09-20 JiaJun Hou , HongJie Liu , ShengXin Zhu

Ordering vertices of a graph is key to minimize fill-in and data structure size in sparse direct solvers, maximize locality in iterative solvers, and improve performance in graph algorithms. Except for naturally parallelizable ordering…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-10-27 Ariful Azad , Mathias Jacquelin , Aydin Buluc , Esmond G. Ng

Finding connected components in a graph is a fundamental problem in graph analysis. In this work, we present a novel minimum-mapping based Contour algorithm to efficiently solve the connectivity problem. We prove that the Contour algorithm…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-11-08 Zhihui Du , Oliver Alvarado Rodriguez , Fuhuan Li , Mohammad Dindoost , David A. Bader

Existing block Kaczmarz methods face challenges in balancing computational efficiency and convergence for large sparse linear systems with scattered nonzero patterns, due to costly partitioning strategies and non-orthogonal projections. In…

Numerical Analysis · Mathematics 2025-06-24 Yu-Fang Liang , Hou-Biao Li

This work introduces a novel algorithm for finding the connected components of a graph where the vertices and edges are grouped into sets defining a Set--Based Graph. The algorithm, under certain restrictions on those sets, has the…

Data Structures and Algorithms · Computer Science 2020-11-30 Ernesto Kofman , Denise Marzorati , Joaquín Fernández

A divide-and-conquer based approach for computing the Moore-Penrose pseudo-inverse of the combinatorial Laplacian matrix $(\bb L^+)$ of a simple, undirected graph is proposed. % The nature of the underlying sub-problems is studied in detail…

Discrete Mathematics · Computer Science 2013-04-09 Gyan Ranjan , Zhi-Li Zhang , Daniel Boley

In the Graph Reconstruction (GR) problem, the goal is to recover a hidden graph by utilizing some oracle that provides limited access to the structure of the graph. The interest is in characterizing how strong different oracles are when the…

Data Structures and Algorithms · Computer Science 2025-09-15 Juha Harviainen , Pekka Parviainen

The Laplacian matrix and its pseudo-inverse for a strongly connected directed graph is fundamental in computing many properties of a directed graph. Examples include random-walk centrality and betweenness measures, average hitting and…

Numerical Analysis · Mathematics 2020-09-16 Daniel Boley

A linear graph is a graph whose vertices are totally ordered. Biological and linguistic sequences with interactions among symbols are naturally represented as linear graphs. Examples include protein contact maps, RNA secondary structures…

Data Structures and Algorithms · Computer Science 2011-03-08 Yasuo Tabei , Daisuke Okanohara , Shuichi Hirose , Koji Tsuda

Identifying the connected components of a graph, apart from being a fundamental problem with countless applications, is a key primitive for many other algorithms. In this paper, we consider this problem in parallel settings. Particularly,…

Data Structures and Algorithms · Computer Science 2020-03-13 Soheil Behnezhad , Laxman Dhulipala , Hossein Esfandiari , Jakub Łącki , Vahab Mirrokni

In this paper we investigated the possibility to use the magnetic Laplacian to characterize directed graphs (a.k.a. networks). Many interesting results are obtained, including the finding that community structure is related to rotational…

Social and Information Networks · Computer Science 2020-08-04 Bruno Messias F. de Resende , Luciano da F. Costa

Graph connection Laplacian (GCL) is a modern data analysis technique that is starting to be applied for the analysis of high dimensional and massive datasets. Motivated by this technique, we study matrices that are akin to the ones…

Probability · Mathematics 2014-11-18 Noureddine El Karoui , Hau-tieng Wu

We provide a deterministic algorithm for computing the $5$-edge-connected components of an undirected multigraph in linear time. There were probably good indications that this computation can be performed in linear time, but no such…

Data Structures and Algorithms · Computer Science 2023-11-09 Evangelos Kosinas

We find the asymptotic number of connected graphs with $k$ vertices and $k-1+l$ edges when $k,l$ approach infinity, reproving a result of Bender, Canfield and McKay. We use the {\em probabilistic method}, analyzing breadth-first search on…

Combinatorics · Mathematics 2007-05-23 Remco van der Hofstad , Joel Spencer

The problem of finding the connected components of a graph is considered. The algorithms addressed to solve the problem are used to solve such problems on graphs as problems of finding points of articulation, bridges, maximin bridge, etc. A…

Discrete Mathematics · Computer Science 2023-07-03 Alexander Prolubnikov

A novel augmented Lagrangian method for solving non-convex programs with nonlinear cost and constraint couplings in a distributed framework is presented. The proposed decomposition algorithm is made of two layers: The outer level is a…

Optimization and Control · Mathematics 2014-07-22 Jean-Hubert Hours , Colin N. Jones

A fundamental question that shrouds the emergence of massively parallel computing (MPC) platforms is how can the additional power of the MPC paradigm be leveraged to achieve faster algorithms compared to classical parallel models such as…

Data Structures and Algorithms · Computer Science 2018-05-09 Sepehr Assadi , Xiaorui Sun , Omri Weinstein

The pseudo-inverse of a graph Laplacian matrix, denoted as $L^\dagger$, finds extensive application in various graph analysis tasks. Notable examples include the calculation of electrical closeness centrality, determination of Kemeny's…

Data Structures and Algorithms · Computer Science 2023-11-20 Meihao Liao , Rong-Hua Li , Qiangqiang Dai , Hongyang Chen , Guoren Wang

The decomposition of undirected graphs simplifies complex problems by breaking them into solvable subgraphs, following the philosophy of divide and conquer. This paper investigates the relationship between atom decomposition and the maximum…

Data Structures and Algorithms · Computer Science 2026-02-24 Pei Heng , Yi Sun , Jianhua Guo

We study a class of simple algorithms for concurrently computing the connected components of an $n$-vertex, $m$-edge graph. Our algorithms are easy to implement in either the COMBINING CRCW PRAM or the MPC computing model. For two related…

Data Structures and Algorithms · Computer Science 2020-03-04 S. Cliff Liu , Robert E. Tarjan
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