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This paper has been withdrawn by the authors. The 3D distribution of self-assembled stacked quantum dots (QDs) is a key parameter to obtain the highest performance in a variety of optoelectronic devices. In this work, we have measured this…

Materials Science · Physics 2012-10-25 Jesús Hernández-Saz , Miriam Herrera , Diego Alonso-Álvarez , Sergio I. Molina

Photoactive proteins absorb light and undergo structural changes that enable them to perform essential biological functions. These proteins are critical for understanding light-induced biological processes, making them important in…

Chemical Physics · Physics 2025-03-28 Sylwia Czach , Jakub Rydzewski , Wiesław Nowak

In this chapter polyelectrolyte intelligent gels are examined along three broad lines. The effects of different physical, chemical and biological stimuli on gels response are analysed and mechanisms of response are outlined. The broad range…

Soft Condensed Matter · Physics 2012-10-15 Piero Chiarelli , Danilo De Rossi

We discuss the repton model of agarose gel electrophoresis of DNA. We review previous results, both analytic and numerical, as well as presenting a new numerical algorithm for the efficient simulation of the model, and suggesting a new…

Soft Condensed Matter · Physics 2015-06-25 G. T. Barkema , M. E. J. Newman

The full understanding of cellular functions requires information about protein numbers for various biomolecular assemblies and their dynamics, which can be partly accessed by super-resolution fluorescence microscopy. Yet, many protein…

Biological Physics · Physics 2020-06-17 Kristin S. Grußmayer , Klaus Yserentant , Dirk-Peter Herten

Two-dimensional mass spectrometry (2D MS) is a method for tandem mass spectrometry that enables the correlation between precursor and fragment ions without the need for ion isolation. On a Fourier transform ion cyclotron resonance mass…

Because of the outstanding ability of two-dimensional electrophoresis to separate complex mixtures of intact proteins, it would be advantageous to apply it to all types of proteins, including hydrophobic and membrane proteins.…

Genomics · Quantitative Biology 2009-04-07 Thierry Rabilloud

Advanced microscopy and/or spectroscopy tools play indispensable role in nanoscience and nanotechnology research, as it provides rich information about the growth mechanism, chemical compositions, crystallography, and other important…

Two-dimensional (2D) materials have showed widespread applications in energy storage and conversion owning to their unique physicochemical, and electronic properties. Most of the valuable information for the materials, such as their…

Computation and Language · Computer Science 2025-11-27 Lijun Shang , Yadong Yu , Wenqiang Kang , Jian Zhou , Dongyue Gao , Pan Xiang , Zhe Liu , Mengyan Dai , Zhonglu Guo , Zhimei Sun

Protein solubilization for two-dimensional electrophoresis (2DE) has to break molecular interactions to separate the biological contents of the material of interest into isolated and intact polypeptides. This must be carried out in…

Genomics · Quantitative Biology 2009-04-23 Thierry Rabilloud

Proteomics will celebrate its 20th year in 2014. In this relatively short period of time, it has invaded most areas of biology and its use will probably continue to spread in the future. These two decades have seen a considerable increase…

Genomics · Quantitative Biology 2014-03-24 Thierry Rabilloud , Pierre Lescuyer

Dimensional analysis is a simple qualitative method for determining essential connections between physical quantities. It is applicable to a multitude of physics problems, many of which canbe introduced early on in a university physics…

Physics Education · Physics 2016-11-26 Michaela Reichelova , Aba Teleki

Materials with thickness ranging from a few nanometers to a single atomic layer present unprecedented opportunities to investigate new phases of matter constrained to the two-dimensional plane.Particle-particle Coulomb interaction is…

Mesoscale and Nanoscale Physics · Physics 2021-10-27 A. Carvalho , P. E. Trevisanutto , S. Taioli , A. H. Castro Neto

Identification of nearly all proteins in a system using data-dependent acquisition (DDA) mass spectrometry has become routine for simple organisms, such as bacteria and yeast. Still, quantification of the identified proteins may be a…

Quantitative Methods · Quantitative Biology 2019-01-21 Jesse G. Meyer

The three-dimensional electron-gas model has been a major focus for many-body theory applied to the electronic properties of metals and semiconductors. Because the model neglects band effects, whereas electronic systems are generally more…

Strongly Correlated Electrons · Physics 2015-06-25 A. H. MacDonald

The ultimate target of proteomics identification is to identify and quantify the protein in the organism. Mass spectrometry (MS) based on label-free protein quantitation has mainly focused on analysis of peptide spectral counts and ion peak…

Quantitative Methods · Quantitative Biology 2013-12-05 Biao He , Baochang Zhang , Yan Fu

Analyzing proteins from single cells by tandem mass spectrometry (MS) has become technically feasible. While such analysis has the potential to accurately quantify thousands of proteins across thousands of single cells, the accuracy and…

The objective of this project is to develop an automated device used to spot protein samples on a hydrophobic membrane to be used for the patented electrophoresis method developed by Chang and Yonan in 2008 [1]. This novel method performs…

Other Quantitative Biology · Quantitative Biology 2023-03-13 Christopher M. Altenderfer , Frank N. Chang , Parsaoran Hutapea

Two-dimensional (2D) materials have been extensively studied in recent years due to their unique properties and great potential for applications. Different types of structural defects could present in 2D materials and have strong influence…

Materials Science · Physics 2016-11-11 Zhangting Wu , Zhenhua Ni

We introduce a microscopically realistic model of a physical gel and use computer simulations to study its static and dynamic properties at thermal equilibrium. The phase diagram comprises a sol phase, a coexistence region ending at a…

Soft Condensed Matter · Physics 2015-06-25 Pablo I. Hurtado , Ludovic Berthier , Walter Kob