Related papers: Modified extended tanh-function method and nonline…
In this paper an effective integrable non-linear model describing the electron spin dynamics in a deformable helical molecule with weak spin-orbit coupling is presented. Non-linearity arises from the electron-lattice interaction and it…
In this study we formulate a theoretical approach, based on a Boltzmann-like kinetic equation, to describe pattern formation in two-dimensional mixtures of microtubular filaments and molecular motors. Following the previous work by Aranson…
This study extends the functional perturbation theory~(FPT) of dynamical systems, which was initially developed for investigating the shifts of magnetic field line trajectories within the chaotic edge region of plasma when subjected to…
Long-distance bidirectional transport of organelles depends on the motor proteins kinesin and dynein. Using quantitative data obtained from a fungal model system, we previously developed ASEP-models of bidirectional motion of motors along…
Mechanical metamaterials are periodic lattice structures with complex unit cell architectures that can achieve extraordinary mechanical properties beyond the capability of bulk materials. A new class of metamaterials is proposed, whose…
The structure of moving nonlinear excitations in one-dimensional electron-phonon systems is studied semi-phenomenologically by using an effective action in which the width of the nonlinear excitation is treated as a dynamical variable. The…
Microtubules are highly regulated dynamic elements of the cytoskeleton of eukaryotic cells. One of the regulation mechanisms observed in living cells is the severing by the proteins katanin and spastin. We introduce a model for the dynamics…
Advanced thermostats for molecular dynamics are proposed on the base of the rigorous Langevin dynamics. Because the latter accounts for the subsystem-bath interactions in details, the bath anisotropy and nonuniformity are described via the…
The multiconfiguration time-dependent Hartree-Fock (MCTDHF) method is formulated for treating the coupled electronic and nuclear dynamics of diatomic molecules without the Born- Oppenheimer approximation. The method treats the full…
In many intracellular processes, the length distribution of microtubules is controlled by depolymerizing motor proteins. Experiments have shown that, following non-specific binding to the surface of a microtubule, depolymerizers are…
In order to describe the nonisothermal dynamics of two-phase flows or binary mixtures such as colloidal suspensions consisting of colloidal particles and solvent on a microscopic level, we derive a new extended dynamical density functional…
This paper studies the nonlinear evolution of magnetic field turbulence in proximity of steady ideal MHD configurations characterized by a small electric current, a small plasma flow, and approximate flux surfaces, a physical setting that…
Electronic transport in a model molecular device coupled to local phonon modes is theoretically analyzed. The method allows for obtaining an accurate approximation of the system's quantum state irrespective of the electron and phonon energy…
It is numerically demonstrated by means of a magnetohydrodynamics code that a short Taylor-Couette setup with a body force can sustain dynamo action. The magnetic threshold is comparable to what is usually obtained in spherical geometries.…
Proteins from the kinesin-8 family promote microtubule (MT) depolymerization, a process thought to be important for the control of microtubule length in living cells. In addition to this MT shortening activity, kinesin 8s are motors that…
We study a model of synthetic molecular motor - a [3]-catenane consisting of two small macrocycles mechanically interlocked with a bigger one - subjected to a time-dependent driving using stochastic thermodynamics. The model presents…
By following the Kazantsev theory and taking into account both microscopic and turbulent diffusion of magnetic fields, we develop a unified treatment of the kinematic and nonlinear stages of turbulent dynamo, and study the dynamo process…
Vector Hamiltonian formalism (VHF) for the description of a weakly nonlinear magnetization dynamics has been developed. Transformation from the traditional Landau-Lifshitz equation, describing dynamics of a magnetization vector…
Electronic properties of heterostructures in which a finite number of Mott-insulator layers are sandwiched by semi-infinite metallic leads are investigated by using the dynamical-mean-field method combined with the Keldysh Green's function…
Magnetic flux tubes in the solar corona support a rich variety of transverse oscillations, which are theoretically interpreted as magnetohydrodynamic (MHD) modes with a fast and/or Alfv\'enic character. In the standard flux tube model made…