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Global magnetohydrodynamic (MHD) instabilities are investigated in a computationally tractable two-dimensional model of the solar tachocline. The model's differential rotation yields stability in the absence of a magnetic field, but if a…
Electromagnetic particle simulation model has been formulated and verified for nonlinear processes of lower hybrid (LH) waves in fusion plasmas. Electron dynamics is described by the drift kinetic equation using either kinetic momentum or…
Nonlinear electromagnetic stabilization by suprathermal pressure gradients found in specific regimes is shown to be a key factor in reducing tokamak microturbulence, augmenting significantly the thermal pressure electromagnetic…
We have derived the full set of MHD equations for incompressible shear flow of a magnetized fluid and considered their solution in the wave-vector space. The linearized equations give the famous amplification of slow magnetosonic waves and…
To evaluate electrostatics interactions, Molecular dynamics (MD) simulations rely on Particle Mesh Ewald (PME), an O(Nlog(N)) algorithm that uses Fast Fourier Transforms (FFTs) or, alternatively, on O(N) Fast Multipole Methods (FMM)…
We propose an alternative mechanism for intracellular cargo transport which results from motor induced longitudinal fluctuations of cytoskeletal microtubules (MT). The longitudinal fluctuations combined with transient cargo binding to the…
In this paper, modulation instability and nonlinear supratransmission are investigated in a one-dimensional chain of atoms using cubic-quartic nonlinearity coefficients. As a result, we establish the discrete nonlinear evolution equation by…
Biological activity gives rise to non-equilibrium fluctuations in the cytoplasm of cells; however, there are few methods to directly measure these fluctuations. Using a reconstituted actin cytoskeleton, we show that the bending dynamics of…
Thermo-optical nonlinearities (TONL) in metasurfaces enable dynamic control of optical properties like transmission, reflection, and absorption through external stimuli such as laser irradiation or temperature. As slow thermal dynamics of…
In weakly magnetized, dilute plasmas in which thermal conduction along magnetic field lines is important, the usual convective stability criterion is modified. Instead of depending on entropy gradients, instability occurs for small…
Recently Ricca and Maggione [MHD (2008)] have presented a very simple and interesting model of stretch-twist-fold dynamo in diffusive media based on numerical simulations of Riemannian flux tubes. In this paper we present a yet simpler way…
A model is developed to simulate micro-scale turbulence driven ZFs, and their impact on the MHD tearing and kink modes is examined. The model is based on a stochastic representation of the micro-scale ZFs with a given Alfv\'{e}n Mach…
Presented here is a novel formulation of the mean-field dynamo as a modulational instability of magnetohydrodynamic (MHD) turbulence. This formulation, termed mean-field wave kinetics (MFWK), is based on the Weyl symbol calculus and allows…
We review some of the most recent results on the dynamics of the Hamiltonian Mean Field (HMF) model, a systems of N planar spins with ferromagnetic infinite-range interactions. We show, in particular, how some of the dynamical anomalies of…
The microtubule cytoskeleton is responsible for sustained, long-range intracellular transport of mRNAs, proteins, and organelles in neurons. Neuronal microtubules must be stable enough to ensure reliable transport, but they also undergo…
Microtubules (MTs) are important cytoskeletal structures, engaged in a number of specific cellular activities, including vesicular traffic, cell cyto-architecture and motility, cell division, and information processing within neuronal…
Motor-driven cytoskeletal remodeling in cellular systems can often be accompanied by a diffusive-like effect at local scales, but distinguishing the contributions of the ordering process, such as active contraction of a network, from this…
Dynamic instability of microtubules is considered using frameworks of non-linear thermodynamics and non-equilibrium reaction-diffusion systems. Stochastic assembly/disassembly phases in the polymerization dynamics of microtubules are…
We show that an infinite number of non-unitary minimal models may describe two dimensional turbulent magnetohydrodynamics (MHD), both in the presence and absence of the Alf'ven effect. We argue that the existence of a critical dynamical…
Using a version of Witten's supersymmetric quantum mechanics proposed by Caticha, we relate Montroll's kink to a traveling, asymmetric Morse double-well potential suggesting in this way a connection between kink modes and vibrational…