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Visual perceptions often come with illusions whose physical origin are not well understood yet. The encoding of stochastic light intensity $x(t)$ into spikes with firing rate $r(t)$ at time $t$ is investigated in an experiment with retinas…

Neurons and Cognition · Quantitative Biology 2021-10-04 Qi-Rong Lin , Po-Yu Chou , C. K. Chan

An ensemble of quantum dot excitons may be used for coherent information manipulation. Due to the ensemble inhomogeneity any optical information retrieval occurs in form of a photon echo. We show that the inhomogeneity can lead to a…

We study the photonic interactions between two distant atoms which are coupled by an optical element (a lens or an optical fiber) focussing part of their emitted radiation onto each other. Two regimes are distinguished depending on the…

Quantum Physics · Physics 2008-07-15 Stefan Rist , Jürgen Eschner , Markus Hennrich , Giovanna Morigi

Proteins employ the information stored in the genetic code and translated into their sequences to carry out well-defined functions in the cellular environment. The possibility to encode for such functions is controlled by the balance…

Biomolecules · Quantitative Biology 2018-05-24 A. Possenti , M. Vendruscolo , C. Camilloni , G. Tiana

During fieldwork in Thailand we observed nearly identical frequencies of co-located flashing fireflies and chirping crickets. Motivated by this, we perform a meta-analysis and show an abundance of evolutionarily distinct species that…

Neurons and Cognition · Quantitative Biology 2025-09-01 Guy Amichay , Vijay Balasubramanian , Daniel M. Abrams

This article introduces the physics of information in the context of molecular biology and genomics. Entropy and information, the two central concepts of Shannon's theory of information and communication, are often confused with each other…

Biomolecules · Quantitative Biology 2007-05-23 Christoph Adami

In studying primate vision, a large body of work focuses on the first feedforward sweep. During this initial time window, information is thought to pass through ventral stream regions in a stage-like fashion in an effort to extract…

Neurons and Cognition · Quantitative Biology 2026-04-15 Daniel Anthes , Sushrut Thorat , Anna Mitola , Paolo Papale , Peter König , Tim C Kietzmann

We typically think of cells as responding to external signals independently by regulating their gene expression levels, yet they often locally exchange information and coordinate. Can such spatial coupling be of benefit for conveying…

Molecular Networks · Quantitative Biology 2015-01-19 Thomas R. Sokolowski , Gašper Tkačik

Changes in a cell's external or internal conditions are usually reflected in the concentrations of the relevant transcription factors. These proteins in turn modulate the expression levels of the genes under their control and sometimes need…

Molecular Networks · Quantitative Biology 2013-08-01 Gasper Tkacik , Curtis G Callan , William Bialek

In this paper we present a theoretical analysis of the faster than light communication possibility based on entangled photons. We analyze designs that may be capable to solve the problem of direct information transfer between members of an…

Quantum Physics · Physics 2024-08-05 Levente Szabó , Pál Maák

Plants exchange information through multiple modalities, including chemical, electrical, mycorrhizal, and acoustic signaling, which collectively support survival, defense, and adaptation. While these processes are well documented in…

Signal Processing · Electrical Eng. & Systems 2025-09-11 Ahmet B. Kilic , Ozgur B. Akan

The evenly-spaced modes of an electromagnetic resonator are coupled to each other by appropriate time-modulation, leading to dynamics analogous to those of particles hopping between different sites of a lattice. This substitution of a real…

We theoretically investigate the ability of free electrons to yield information on the nonlinear Floquet dynamics of atomic systems subject to intense external illumination. By applying a quantum-mechanical formalism to describe the…

Quantum Physics · Physics 2022-09-12 Eduardo Arqué López , Valerio Di Giulio , F. Javier García de Abajo

Optical Wireless Communication (OWC) is regarded as an auspicious communication approach that can outperform the existing wireless technology. It utilizes LED lights, whose subtle variation in radiant intensity generate a binary data…

Robotics · Computer Science 2022-05-10 Fadi Al-Turjman , Diletta Cacciagrano , Leonardo Mostarda , Mattia Paccamiccio , Zaib Ullah

In the brain, information is encoded, transmitted and used to inform behaviour at the level of timing of action potentials distributed over population of neurons. To implement neural-like systems in silico, to emulate neural function, and…

Neural and Evolutionary Computing · Computer Science 2022-12-09 Stefano Panzeri , Ella Janotte , Alejandro Pequeño-Zurro , Jacopo Bonato , Chiara Bartolozzi

Non-isolated systems have diverse coupling relations with the external environment. These relations generate complex thermodynamics and information transmission between the system and its environment. The framework depicted in the current…

Statistical Mechanics · Physics 2022-06-15 Yang Tian , Pei Sun

Chemical reactions can be induced at a distance due to the propagation of electromagnetic signals during intermediate chemical stages. Although it is well known at optical frequencies, e.g. photosynthetic reactions, electromagnetic signals…

General Physics · Physics 2020-04-07 A. Widom , J. Swain , Y. N. Srivastava , S. Sivasubramanian

We consider a monoenergetic beam of moving charged particles interacting with two separated oscillating electric fields. Time-periodic linear potential is assumed to model the light-particle interaction using a nonrelativistic, quantum…

Quantum Physics · Physics 2018-07-02 Lóránt Zs. Szabó , Mihály G. Benedict , Péter Földi

These are notes for a set of 7 two-hour lectures given at the 2010 Summer School on Quantitative Evolutionary and Comparative Genomics at OIST, Okinawa, Japan. The emphasis is on understanding how biological systems process information. We…

Molecular Networks · Quantitative Biology 2010-06-23 Gašper Tkačik

Data protection methods like cryptography, despite being effective, inadvertently signal the presence of secret communication, thereby drawing undue attention. Here, we introduce an optical information hiding camera integrated with an…

Optics · Physics 2024-06-13 Bijie Bai , Ryan Lee , Yuhang Li , Tianyi Gan , Yuntian Wang , Mona Jarrahi , Aydogan Ozcan