Related papers: Chain Rotations: a New Look at Tree Distance
For a graph $G$, and two distinct vertices $u$ and $v$ of $G$, let $n_G(u,v)$ be the number of vertices of $G$ that are closer in $G$ to $u$ than to $v$. Miklavi\v{c} and \v{S}parl (arXiv:2011.01635v1) define the distance-unbalancedness…
Trees without vertices of degree $2$ are sometimes named topological trees. In this work, we bring forward the study of the inducibility of (rooted) topological trees with a given number of leaves. The inducibility of a topological tree $S$…
Let $P$ be a collection of $n$ points moving along pseudo-algebraic trajectories in the plane. One of the hardest open problems in combinatorial and computational geometry is to obtain a nearly quadratic upper bound, or at least a subcubic…
In this paper we propose formulas for the distance between vertices of a generalized Sierpi\'{n}ski graph $S(G,t)$ in terms of the distance between vertices of the base graph $G$. In particular, we deduce a recursive formula for the…
A transversal in a rooted tree is any set of nodes that meets every path from the root to a leaf. We let c(T,k) denote the number of transversals of size k in a rooted tree T. We define a partial order on the set of all rooted trees with n…
We consider a natural notion of search trees on graphs, which we show is ubiquitous in various areas of discrete mathematics and computer science. Search trees on graphs can be modified by local operations called rotations, which generalize…
We provide a uniform upper bound on the minimal drift so that the one-per-site frog model on a $d$-ary tree is recurrent. To do this, we introduce a subprocess that couples across trees with different degrees. Finding couplings for frog…
Consider the d-dimensional lattice Z^d where each vertex is ``open'' or ``closed'' with probability p or 1-p, respectively. An open vertex v is connected by an edge to the closest open vertex w such that the dth co-ordinates of v and w…
We introduce the concept of Most, and Least, Compact Spanning Trees - denoted respectively by $T^*(G)$ and $T^\#(G)$ - of a simple, connected, undirected and unweighted graph $G(V, E, W)$. For a spanning tree $T(G) \in \mathcal{T}(G)$ to be…
Sliced Optimal Transport (OT) simplifies the OT problem in high-dimensional spaces by projecting supports of input measures onto one-dimensional lines and then exploiting the closed-form expression of the univariate OT to reduce the…
We describe an algorithm for comparing two RNA secondary structures coded in the form of trees that introduces two new operations, called node fusion and edge fusion, besides the tree edit operations of deletion, insertion, and relabeling…
In this article, we propose tree edit distance with variables, which is an extension of the tree edit distance to handle trees with variables and has a potential application to measuring the similarity between mathematical formulas,…
The tree edit distance problem is a natural generalization of the classic string edit distance problem. Given two ordered, edge-labeled trees $T_1$ and $T_2$, the edit distance between $T_1$ and $T_2$ is defined as the minimum total cost of…
We determine upper and lower bounds for the number of maximum matchings (i.e., matchings of maximum cardinality) $m(T)$ of a tree $T$ of given order. While the trees that attain the lower bound are easily characterised, the trees with…
An approximate Steiner tree is a Steiner tree on a given set of terminals in Euclidean space such that the angles at the Steiner points are within a specified error e from 120 degrees.This notion arises in numerical approximations of…
How many adjacency matrix queries (also known as pair queries) are required to estimate the size of a maximum matching in an $n$-vertex graph $G$? We study this fundamental question in this paper. On the upper bound side, an algorithm of…
Let $T$ be a tree with vertex set $\{1, \ldots, n\}$ such that each edge is assigned a nonzero weight. The squared distance matrix of $T,$ denoted by $\Delta,$ is the $n \times n$ matrix with $(i,j)$-element $d(i,j)^2,$ where $d(i,j)$ is…
Let C be a linear code with length n and minimum distance d. The stopping redundancy of C is defined as the minimum number of rows in a parity-check matrix for C such that the smallest stopping sets in the corresponding Tanner graph have…
A maximal repetition, or run, in a string, is a maximal periodic substring whose smallest period is at most half the length of the substring. In this paper, we consider runs that correspond to a path on a trie, or in other words, on a…
We consider the classical tree edit distance between ordered labeled trees, which is defined as the minimum-cost sequence of node edit operations that transform one tree into another. The state-of-the-art solutions for the tree edit…