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The coherent dynamics of vibronic wave packets in the green fluorescent protein is reported. At room temperature the non-stationary dynamics following impulsive photoexcitation displays an oscillating optical transmissivity pattern with…

To explain experimentally observed oscillatory dynamics of highly efficient process of excitation energy transfer (EET) in Fenna-Matthews-Olson (FMO) complex, most theoretical models assume the same local protein environment around all the…

Biological Physics · Physics 2018-01-26 Davinder Singh , Shubhrangshu Dasgupta

We report the experimental observation of Coherent Population Oscillation (CPO) based light storage in an atomic vapor cell at room temperature. Using the ultranarrow CPO between the ground levels of a $\Lambda$ system selected by…

Atomic Physics · Physics 2015-11-11 M. -A. Maynard , F. Bretenaker , F. Goldfarb

Compositional engineering of the optical properties of hybrid organic-inorganic lead halide perovskites is one of the cornerstones for the realization of efficient solar cells and tailored light-emitting devices. We study the effect of…

The diffusional dynamics and vibrational spectroscopy of molecular hydrogen (H$_2$) in myoglobin (Mb) is characterized. Hydrogen has been implicated in a number of physiologically relevant processes, including cellular aging or…

Chemical Physics · Physics 2024-09-16 Jiri Käser , Kai Töpfer , Markus Meuwly

Research into the efficiency of photosynthetic light harvesting has focused on two factors: (1) entanglement of chromophores, and (2) environmental noise. While chromophores are conjugated $\pi$-bonding molecules with strongly correlated…

Biological Physics · Physics 2013-03-29 David A. Mazziotti

We have previously demonstrated that in the context of two-dimensional (2D) coherent electronic spectroscopy measured by phase modulation and phase-sensitive detection, an \emph{incoherent} nonlinear response, due to pairs of…

We present experimental evidence for a long-range protein-protein interaction in purple membrane (PM). The interprotein dynamics were quantified by measuring the spectrum of the acoustic phonons in the 2D bacteriorhodopsin (BR) protein…

Biological Physics · Physics 2011-06-16 Maikel C. Rheinstadter , Karin Schmalzl , Kathleen Wood , Dieter Strauch

This work presents swarm parameters of electrons (the bulk drift velocity, the bulk longitudinal component of the diffusion tensor, and the effective ionization frequency) in C$_2$H$_n$, with $n =$ 2, 4 and 6, measured in a scanning drift…

Plasma Physics · Physics 2020-05-20 N R Pinhão , D Loffhagen , M Vass , P Hartmann , I Korolov , S Dujko , D Bošnjaković , Z Donkó

We develop a method to simulate the excitonic dynamics of realistic photosynthetic light harvesting systems including non-Markovian coupling to phonon degrees of freedom, under excitation by N-photon Fock state pulses. This method combines…

Biological Physics · Physics 2023-06-27 Liwen Ko , Robert L. Cook , K. Birgitta Whaley

We report on the storage of light via the phenomenon of Coherent Population Oscillation (CPO) in an atomic cesium vapor at room temperature. In the experiment the optical information of a probe field is stored in the CPO of two ground…

The electronic structure of a multichromophoric molecular complex containing two of each borondipyrromethane dye, Zn-tetraphenyl-porphyrin, bisphenyl anthracene and a fullerene are studied using density functional theory. The snowflake…

Materials Science · Physics 2013-06-12 Luis Basurto , Rajendra R. Zope , Tunna Baruah

The dynamics of long-wavelength ($k_\theta<1.4 \mathrm{\ cm^{-1}}$), broadband (20-200 kHz) electron temperature fluctuations ($\tilde T_e/T_e$) of plasmas in gas-puff experiments were observed for the first time in HL-2A tokamak. In a…

Excitation of a model photosynthetic molecular aggregate by incoherent sunlight is systematically examined. For a closed system, the excited state coherence induced by the sunlight oscillates with an average amplitude that is inversely…

Chemical Physics · Physics 2014-08-25 Jan Olšina , Arend G. Dijkstra , Chen Wang , Jianshu Cao

The initial energy transfer in photosynthesis occurs between the light-harvesting pigments and on ultrafast timescales. We analyze the carotenoid to bacteriochlorophyll energy transfer in LH2 Marichromatium purpuratum as well as in an…

We simulate the long-range inter-complex electronic energy transfer in Photosystem II -- from the antenna complex, via a core complex, to the reaction center -- using a non-Markovian (ZOFE) quantum master equation description that allows us…

Chemical Physics · Physics 2016-07-27 Jan J. J. Roden , Doran I. G. Bennett , K. Birgitta Whaley

We present a rigorous theoretical description of excitonic dynamics in molecular light-harvesting aggregates photoexcited by weak-intensity radiation of arbitrary properties. While the interaction with light is included up to the second…

Chemical Physics · Physics 2021-01-01 Veljko Janković , Tomáš Mančal

The most recent crystal structure of the Fenna-Matthews-Olson (FMO) protein complex indicates that each subunit contains an additional eighth chromophore. It has been proposed that this extra site functions as a link between the chlorosome…

Biological Physics · Physics 2011-09-16 Jeremy Moix , Jianlan Wu , Pengfei Huo , David Coker , Jianshu Cao

We describe a method for simulating exciton dynamics in protein-pigment complexes, including effects from charge transfer as well as fluorescence. The method combines the hierarchical equations of motion, which are used to describe quantum…

Chemical Physics · Physics 2022-11-23 Thomas P. Fay , David T. Limmer

Self-assembled supramolecular aggregates are excellent candidates for the design of efficient excitation transport devices. Both artificially prepared and natural photosynthetic aggregates in plants and bacteria present an important degree…

Quantum Physics · Physics 2017-09-04 Alejandro D. Somoza , Ke-Wei Sun , Rafael A. Molina , Yang Zhao