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Biomedical researchers face increasing challenges in navigating millions of publications in diverse domains. Traditional search engines typically return articles as ranked text lists, offering little support for global exploration or…

Information Retrieval · Computer Science 2026-01-29 Huan He , Xueqing Peng , Yutong Xie , Qijia Liu , Chia-Hsuan Chang , Lingfei Qian , Brian Ondov , Qiaozhu Mei , Hua Xu

The promise of multimodal models for real-world applications has inspired research in visualizing and understanding their internal mechanics with the end goal of empowering stakeholders to visualize model behavior, perform model debugging,…

Rule-based modeling is a powerful way to model kinetic interactions in biochemical systems. Rules enable a precise encoding of biochemical interactions at the resolution of sites within molecules, but obtaining an integrated global view…

Quantitative Methods · Quantitative Biology 2015-09-04 John A. P. Sekar , Jose-Juan Tapia , James R. Faeder

Online communities have increased in size and importance dramatically over the last decade. The fact that many communities are online means that it is possible to extract information about these communities and the connections between their…

Social and Information Networks · Computer Science 2013-07-24 Jonathan P. Bowen

Affective sharing within groups strengthens coordination and empathy, leads to better health outcomes, and increases productivity and performance. Existing tools for affective sharing face one main challenge: creating a representation of…

Human-Computer Interaction · Computer Science 2020-10-15 Chao Ying Qin , Marios Constantinides , Luca Maria Aiello , Daniele Quercia

We introduce VEXUS, an interactive visualization framework for exploring user data to fulfill tasks such as finding a set of experts, forming discussion groups and analyzing collective behaviors. User data is characterized by a combination…

Understanding how local environments influence individual behaviors, such as voting patterns or suicidal tendencies, is crucial in social science to reveal and reduce spatial disparities and promote social well-being. With the increasing…

Human-Computer Interaction · Computer Science 2023-09-21 Yue Yu , Yifang Wang , Qisen Yang , Di Weng , Yongjun Zhang , Xiaogang Wu , Yingcai Wu , Huamin Qu

Visualization plays a relevant role for discovering patterns in big sets of data. In fact, the most common way to help a human with a pattern interpretation is through a graphic. In 2D/3D virtual environments for procedural training the…

Human-Computer Interaction · Computer Science 2025-12-24 Diego Riofrío-Luzcando , Jaime RamÍrez , Cristian Moral , Angélica de Antonio , Marta Berrocal-Lobo

The visual analytics community has proposed several user modeling algorithms to capture and analyze users' interaction behavior in order to assist users in data exploration and insight generation. For example, some can detect exploration…

Human-Computer Interaction · Computer Science 2022-08-11 Sunwoo Ha , Shayan Monadjemi , Roman Garnett , Alvitta Ottley

Collective robotic systems are biologically inspired and advantageous due to their apparent global intelligence and emergent behaviors. Many applications can benefit from the incorporation of collectives, including environmental monitoring,…

Human-Computer Interaction · Computer Science 2020-09-22 Karina A. Roundtree , Jason R. Cody , Jennifer Leaf , H. Onan Demirel , Julie A. Adams

Web 2.0 is transforming the internet: Information consumers become information producers and consumers at the same time. In virtual places like Facebook, Youtube, discussion boards and weblogs diversificated topics, groups and issues are…

Computers and Society · Computer Science 2010-06-23 Andreas C. Sonnenbichler

Online user studies of visualizations, visual encodings, and interaction techniques are ubiquitous in visualization research. Yet, designing, conducting, and analyzing studies effectively is still a major burden. Although various packages…

The recent emergence of online citizen science is illustrative of an efficient and effective means to harness the crowd in order to achieve a range of scientific discoveries. Fundamentally, citizen science projects draw upon crowds of…

Social and Information Networks · Computer Science 2014-07-01 Ramine Tinati , Elena Simperl , Markus Luczak-Roesch , Max Van Kleek , Nigel Shadbolt

Interest in collective robotic systems has increased rapidly due to the potential benefits that can be offered to operators, such as increased safety and support, who perform challenging tasks in high-risk environments. Human-collective…

Human-Computer Interaction · Computer Science 2021-06-07 Karina A. Roundtree , Jason R. Cody , Jennifer Leaf , H. Onan Demirel , Julie A. Adams

Online forums are rich sources of information about user communication activity over time. Finding temporal patterns in online forum communication threads can advance our understanding of the dynamics of conversations. The main challenge of…

Social and Information Networks · Computer Science 2012-01-12 Andrey Kan , Jeffrey Chan , Conor Hayes , Bernie Hogan , James Bailey , Christopher Leckie

Human activities increasingly take place in online environments, providing novel opportunities for relating individual behaviours to population-level outcomes. In this paper, we introduce a simple generative model for the collective…

Physics and Society · Physics 2014-07-24 James P. Gleeson , Davide Cellai , Jukka-Pekka Onnela , Mason A. Porter , Felix Reed-Tsochas

We introduce RuleVis, a web-based application for defining and editing "correct-by-construction" executable rules that model biochemical functionality, which can be used to simulate the behavior of protein-protein interaction networks and…

Quantitative Methods · Quantitative Biology 2019-11-13 David Abramov , Jasmine Otto , Mahika Dubey , Cassia Artanegara , Pierre Boutillier , Walter Fontana , Angus G. Forbes

Cross-disciplinary teams increasingly work with high-dimensional scientific datasets, yet fragmented toolchains and limited support for shared exploration hinder collaboration. Prior immersive visualization and analytics research has…

Human-Computer Interaction · Computer Science 2026-02-05 Fahim Arsad Nafis , Jie Li , Simon Su , Songqing Chen , Bo Han

Can we describe social systems quantitatively and predictively, when we know all the actions, interactions, and states of individuals? We interpret human societies as co-evolutionary systems of individuals and their interactions. Based on…

Physics and Society · Physics 2018-11-21 Stefan Thurner

Collective idea generation and innovation processes are complex and dynamic, involving a large amount of qualitative narrative information that is difficult to monitor, analyze, and visualize using traditional methods. In this study, we…

Social and Information Networks · Computer Science 2022-07-19 Yiding Cao , Yingjun Dong , Minjun Kim , Neil G. MacLaren , Sriniwas Pandey , Shelley D. Dionne , Francis J. Yammarino , Hiroki Sayama
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