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We introduce the concept of communicability angle between a pair of nodes in a graph. We provide strong analytical and empirical evidence that the average communicability angle for a given network accounts for its spatial efficiency on the…

Physics and Society · Physics 2015-07-30 Ernesto Estrada , Naomichi Hatano

Many biological systems perform close to their physical limits, but promoting this optimality to a general principle seems to require implausibly fine tuning of parameters. Using examples from a wide range of systems, we show that this…

In this report trial-to-trial variations in the synchronized responses of neural networks are offered as evidence for excitation-inhibition ratio being a dynamic variable over time scales of minutes. Synchronized network responses to…

Neurons and Cognition · Quantitative Biology 2015-01-05 Netta Haroush , Shimon Marom

The mammalian brain is a metabolically expensive device, and evolutionary pressures have presumably driven it to make productive use of its resources. For sensory areas, this concept has been expressed more formally as an optimality…

Neurons and Cognition · Quantitative Biology 2016-03-02 Deep Ganguli , Eero P. Simoncelli

Many dynamical phenomena in complex systems concern spreading that plays out on top of networks with changing architecture over time -- commonly known as temporal networks. A complex system's proneness to facilitate spreading phenomena,…

Physics and Society · Physics 2022-05-06 Mark M. Dekker , Raoul D. Schram , Jiamin Ou , Debabrata Panja

This work proposes a two-dimensional electrophysiological model for describing neuronal responses to external electric stimuli under patch-clamped conditions. Our proposed model successfully captures the key features of the Hodgkin-Huxley…

Neurons and Cognition · Quantitative Biology 2023-12-13 Lízia Maria Gonçalves Branco , Rui Manuel Agostinho Dilão

Units of complex systems -- such as neurons in the brain or individuals in societies -- must communicate efficiently to function properly: e.g., allowing electrochemical signals to travel quickly among functionally connected neuronal areas…

Physics and Society · Physics 2020-03-17 Arsham Ghavasieh , Manlio De Domenico

The principle of maximum entropy is a broadly applicable technique for computing a distribution with the least amount of information possible while constrained to match empirically estimated feature expectations. However, in many real-world…

Machine Learning · Computer Science 2022-08-16 Kenneth Bogert , Yikang Gui , Prashant Doshi

The reliable detection of environmental molecules in the presence of noise is an important cellular function, yet the underlying computational mechanisms are not well understood. We introduce a model of two interacting sensors which allows…

Biological Physics · Physics 2020-02-25 Vudtiwat Ngampruetikorn , David J. Schwab , Greg J. Stephens

Using results from neurobiology on perceptual decision making and value-based decision making, the problem of decision making between lotteries is reformulated in an abstract space where uncertain prospects are mapped to corresponding…

Neurons and Cognition · Quantitative Biology 2020-01-03 Adnan Rebei

This work clarifies the relation between network circuit (topology) and behavior (information transmission and synchronization) in active networks, e.g. neural networks. As an application, we show how to determine a network topology that is…

Chaotic Dynamics · Physics 2015-05-13 M. S. Baptista , J. X. de Carvalho , M. S. Hussein

New entropy measures have been recently introduced for the quantification of the complexity of networks. Most of these entropy measures apply to static networks or to dynamical processes defined on static complex networks. In this paper we…

Disordered Systems and Neural Networks · Physics 2015-05-30 Kun Zhao , Arda Halu , Simone Severini , Ginestra Bianconi

A critical mystery in neuroscience lies in determining how anatomical structure impacts the complex functional dynamics of human thought. How does large-scale brain circuitry constrain states of neuronal activity and transitions between…

Neurons and Cognition · Quantitative Biology 2016-07-08 Shi Gu , Matthew Cieslak , Benjamin Baird , Sarah F. Muldoon , Scott T. Grafton , Fabio Pasqualetti , Danielle S. Bassett

Neuronal avalanches measured in vitro and in vivo in different cortical networks consistently exhibit power law behaviour for the size and duration distributions with exponents typical for a mean field self-organized branching process.…

Neurons and Cognition · Quantitative Biology 2016-08-12 L. Michiels van Kessenich , L. de Arcangelis , H. J. Herrmann

Human communication is commonly represented as a temporal social network, and evaluated in terms of its uniqueness. We propose a set of new entropy-based measures for human communication dynamics represented within the temporal social…

Social and Information Networks · Computer Science 2018-10-29 Marcin Kulisiewicz , Przemysław Kazienko , Bolesław K. Szymański , Radosław Michalski

Empirical evidence of scaling behaviors in neuronal avalanches suggests that neuronal populations in the brain operate near criticality. Departure from scaling in neuronal avalanches has been used as a measure of distance to criticality and…

Neurons and Cognition · Quantitative Biology 2025-11-21 T. S. A. N. Simões , F. Lombardi , D. Plenz , H. J. Herrmann , L. de Arcangelis

Self-organized critical states are found in many natural systems, from earthquakes to forest fires, they have also been observed in neural systems, particularly, in neuronal cultures. However, the presence of critical states in the awake…

Neurons and Cognition · Quantitative Biology 2012-08-20 Nima Dehghani , Nicholas G. Hatsopoulos , Zach D. Haga , Rebecca A. Parker , Bradley Greger , Eric Halgren , Sydney S. Cash , Alain Destexhe

We propose a new way to measure the balance between freedom and coherence in a dynamical system and a new measure of its internal variability. Based on the concept of entropy and ideas from neuroscience and information theory, we define…

Dynamical Systems · Mathematics 2016-11-21 Karl Petersen , Benjamin Wilson

Sensitivity to small changes in the environment is crucial for many real-world tasks, enabling living and artificial systems to make correct behavioral decisions. It has been shown that such sensitivity is maximized when a system operates…

Disordered Systems and Neural Networks · Physics 2026-02-11 Sahel Azizpour , Viola Priesemann , Johannes Zierenberg , Anna Levina

We present a technique for entropy optimization to calculate a distribution from its moments. The technique is based upon maximizing a discretized form of the Shannon entropy functional by mapping the problem onto a dual space where an…

Disordered Systems and Neural Networks · Physics 2009-11-10 K. Bandyopadhyay , A. K. Bhattacharya , Parthapratim Biswas , D. A. Drabold