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A competition process on $\mathbb{Z}^d$ is considered, where two species compete to color the sites. The entities are driven by branching random walks. Specifically red (blue) particles reproduce in discrete time and place offspring…

Probability · Mathematics 2022-03-29 Maria Deijfen , Timo Vilkas

The competition for resources is a defining feature of microbial communities. In many contexts, from soils to host-associated communities, highly diverse microbes are organized into metabolic groups or guilds with similar resource…

Physics and Society · Physics 2025-05-05 Xiaowen Chen , Kyle Crocker , Seppe Kuehn , Aleksandra M. Walczak , Thierry Mora

The totally asymmetric simple exclusion process (TASEP) is a stochastic model for the unidirectional flow of interacting particles on a 1D-lattice that is much used in systems biology and statistical physics. Its master equation describes…

Dynamical Systems · Mathematics 2026-04-20 Kilian Pioch , Lars Grüne , Thomas Kriecherbauer , Michael Margaliot

A unified thermodynamic formalism describing the efficiency of learning is proposed. First, we derive an inequality, which is more strength than Clausius's inequality, revealing the lower bound of the entropy-production rate of a subsystem.…

Statistical Mechanics · Physics 2025-04-15 Shanhe Su , Ousi Pan , Shihao Xia , Jincan Chen , Chikako Uchiyama

Effective multicellularity requires both cooperation and competition between constituent cells. Cooperation involves sacrificing individual fitness in favor of that of the community, but excessive cooperation makes the community susceptible…

Populations and Evolution · Quantitative Biology 2022-11-21 Thomas C. T. Michaels , L. Mahadevan

Metagenomics has revealed hundreds of bacterial species in almost all microbiota. In a few well-studied cases, bacterial communities have been observed to coordinate their metabolic fluxes. In principle, bacteria can divide tasks to reap…

Populations and Evolution · Quantitative Biology 2016-04-12 Thibaud Taillefumier , Anna Posfai , Yigal Meir , Ned S. Wingreen

Living cells use readout molecules to record the state of receptor proteins, similar to measurements or copies in typical computational devices. But is this analogy rigorous? Can cells be optimally efficient, and if not, why? We show that,…

Molecular Networks · Quantitative Biology 2017-04-12 Thomas E. Ouldridge , Christopher C. Govern , Pieter Rein ten Wolde

In its simplest form, the competitive exclusion principle states that a number of species competing for a smaller number of resources cannot coexist. However, it has been observed empirically that in some settings it is possible to have…

Populations and Evolution · Quantitative Biology 2021-02-18 Alexandru Hening , Dang H. Nguyen

In this paper we deal with linear production situations in which there is a limited common-pool resource, managed by an external agent. The profit that a producer, or a group of producers, can attain depends on the amount of common-pool…

Optimization and Control · Mathematics 2019-12-09 Elisabeth Gutierrez , Natividad Llorca , Joaquin Sanchez-Soriano , Manuel Mosquera

We study an individual-based model in which two spatially-distributed species, characterized by different diffusivities, compete for resources. We consider three different ecological settings. In the first, diffusing faster has a cost in…

Populations and Evolution · Quantitative Biology 2016-01-27 Simone Pigolotti , Roberto Benzi

We study a continuous-space version of the totally asymmetric simple exclusion process (TASEP), consisting of interacting Brownian particles subject to a driving force in a periodic external potential. Particles are inserted at the leftmost…

Statistical Mechanics · Physics 2010-02-02 Jose Eduardo de Oliveira Rodrigues , Ronald Dickman

The problem of unicellular-multicellular transition is one of the main issues that is discussing in evolutionary biology. In [1] the fitness of a colony of cells is considered in terms of its two basic components, viability and fecundity.…

Populations and Evolution · Quantitative Biology 2015-06-08 Fuad Aleskerov , Denis Tverskoy

Using molecular dynamics simulation, we investigate the effect of confinement on a system that comprises several stiff segmented polymer chains where each chain has similar segments, but length and stiffness of the segments vary among the…

Soft Condensed Matter · Physics 2015-07-14 Arash Azari , Kristian K. Müller-Nedebock

This paper is concerned with a mathematical model of competition for resource where species consume noninteracting resources. This system of differential equations is formally obtained by renormalizing the MacArthur's competition model at…

Dynamical Systems · Mathematics 2020-07-27 Wenli Cai , Hailiang Liu

Totally asymmetric simple exclusion process (TASEP) was originally introduced as a model for the traffic-like collective movement of ribosomes on a messenger RNA (mRNA) that serves as the track for the motor-like forward stepping of…

Statistical Mechanics · Physics 2019-08-14 Bhavya Mishra , Debashish Chowdhury

Collaborative competitions have gained popularity in the scientific and technological fields. These competitions involve defining tasks, selecting evaluation scores, and devising result verification methods. In the standard scenario,…

Machine Learning · Computer Science 2024-08-22 Sergio Nava-Muñoz , Mario Graff , Hugo Jair Escalante

We study scheduling control of parallel processing networks in which some resources need to simultaneously collaborate to perform some activities and some resources multitask. Resource collaboration and multitasking give rise to…

Optimization and Control · Mathematics 2020-12-29 Erhun Özkan

Our earlier work in \cite{nguyen2022population} shows that concentrating the resources on the upstream end tends to maximize the total biomass in a metapopulation model for a stream species. In this paper, we continue our research direction…

Populations and Evolution · Quantitative Biology 2023-07-31 Tung D. Nguyen , Yixiang Wu , Tingting Tang , Amy Veprauskas , Ying Zhou , Behzad Djafari Rouhani , Zhisheng Shuai

In the asymmetric simple exclusion process on the integers each particle waits exponential time, then with probability p it moves one step to the right if the site is unoccupied, otherwise it stays put; and with probability q=1-p it moves…

Probability · Mathematics 2013-02-18 Craig A. Tracy , Harold Widom

Explaining biodiversity is a central focus in theoretical ecology. A significant obstacle arises from the Competitive Exclusion Principle (CEP), which states that two species competing for the same type of resources cannot coexist at…

Populations and Evolution · Quantitative Biology 2025-06-18 Ju Kang , Yiyuan Niu , Xin Wang
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