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Traditional algorithms for detecting differences in source code focus on differences between lines. As such, little can be learned about abstract changes that occur over time within a project. Structural differencing on the program's…

Software Engineering · Computer Science 2013-07-09 Jason Dagit , Matthew Sottile

We present an open-source topology-aware hierarchical unstructured mesh partitioning and load-balancing tool TreePart. The framework provides powerful abstractions to automatically detect and build hierarchical MPI topology resembling the…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-08-04 Pavanakumar Mohanamuraly , Gabriel Staffelbach

In order to speed-up classification models when facing a large number of categories, one usual approach consists in organizing the categories in a particular structure, this structure being then used as a way to speed-up the prediction…

Machine Learning · Computer Science 2015-11-26 Aurélia Léon , Ludovic Denoyer

Computing a Single-Linkage Dendrogram (SLD) is a key step in the classic single-linkage hierarchical clustering algorithm. Given an input edge-weighted tree $T$, the SLD of $T$ is a binary dendrogram that summarizes the $n-1$ clusterings…

Data Structures and Algorithms · Computer Science 2024-05-14 Laxman Dhulipala , Xiaojun Dong , Kishen N Gowda , Yan Gu

In software reverse engineering, decompilation is the process of recovering source code from binary files. Decompilers are used when it is necessary to understand or analyze software for which the source code is not available. Although…

Software Engineering · Computer Science 2021-02-25 Javier Escalada , Ted Scully , Francisco Ortin

Data exploration and visualization systems are of great importance in the Big Data era, in which the volume and heterogeneity of available information make it difficult for humans to manually explore and analyse data. Most traditional…

Human-Computer Interaction · Computer Science 2016-02-22 Nikos Bikakis , George Papastefanatos , Melina Skourla , Timos Sellis

Component Based Software Engineering (CBSE) seeks to promote the reuse of software by using existing software modules into the development process. However, the availability of such a reusable component is not immediate and is costly and…

Software Engineering · Computer Science 2021-02-10 Cezar Sas , Andrea Capiluppi

Hierarchical clustering is a recursive partitioning of a dataset into clusters at an increasingly finer granularity. Motivated by the fact that most work on hierarchical clustering was based on providing algorithms, rather than optimizing a…

Data Structures and Algorithms · Computer Science 2017-04-10 Vincent Cohen-Addad , Varun Kanade , Frederik Mallmann-Trenn , Claire Mathieu

In this paper, we introduce a set of tools for providing user-friendly explanations in an explanation-based constraint programming system. The idea is to represent the constraints of a problem as an hierarchy (a tree). Users are then…

Programming Languages · Computer Science 2007-05-23 Narendra Jussien , Samir Ouis

Hierarchical clustering is an effective, interpretable method for analyzing structure in data. It reveals insights at multiple scales without requiring a predefined number of clusters and captures nested patterns and subtle relationships,…

With dramatic improvements in optimization software, the solution of large-scale problems that seemed intractable decades ago are now a routine task. This puts even more real-world applications into the reach of optimizers. At the same…

Optimization and Control · Mathematics 2023-03-07 Marc Goerigk , Michael Hartisch

Object-Oriented Programming (OOP) has become a crucial paradigm for managing the growing complexity of modern software systems, particularly in fields like machine learning, deep learning, large language models (LLM), and data analytics.…

Computation and Language · Computer Science 2025-12-24 Tianyang Wang , Ziqian Bi , Keyu Chen , Jiawei Xu , Qian Niu , Junyu Liu , Benji Peng , Ming Li , Sen Zhang , Xuanhe Pan , Jinlang Wang , Pohsun Feng , Yizhu Wen , Xinyuan Song , Ming Liu

Previously, we proposed a physically inspired rule to organize the data points in a sparse yet effective structure, called the in-tree (IT) graph, which is able to capture a wide class of underlying cluster structures in the datasets,…

Computer Vision and Pattern Recognition · Computer Science 2015-06-22 Teng Qiu , Yongjie Li

Co-clustering simultaneously clusters rows and columns, revealing more fine-grained groups. However, existing co-clustering methods suffer from poor scalability and cannot handle large-scale data. This paper presents a novel and scalable…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-03-20 Zihan Wu , Zhaoke Huang , Hong Yan

Software architecture is inherently knowledge-centric. The architectural knowledge is distributed across heterogeneous software artifacts such as requirements documents, design diagrams, code, and documentation, making it difficult for…

Software Engineering · Computer Science 2026-01-28 Jan Keim , Angelika Kaplan

A new model of causal failure is presented and used to solve a novel replica placement problem in data centers. The model describes dependencies among system components as a directed graph. A replica placement is defined as a subset of…

Data Structures and Algorithms · Computer Science 2017-01-09 K. Alex Mills , R. Chandrasekaran , Neeraj Mittal

Clustering ensemble has emerged as an important research topic in the field of machine learning. Although numerous methods have been proposed to improve clustering quality, most existing approaches overlook the need for interpretability in…

Machine Learning · Computer Science 2025-06-09 Hang Lv , Lianyu Hu , Mudi Jiang , Xinying Liu , Zengyou He

Recent research has repeatedly shown that machine learning techniques can be applied to either whole files or file fragments to classify them for analysis. We build upon these techniques to show that for samples of un-labeled compiled…

Machine Learning · Statistics 2018-05-08 John Clemens

Probabilistic programming frameworks are powerful tools for statistical modelling and inference. They are not immediately generalisable to phylogenetic problems due to the particular computational properties of the phylogenetic tree object.…

Populations and Evolution · Quantitative Biology 2022-11-11 Christiaan Swanepoel , Mathieu Fourment , Xiang Ji , Hassan Nasif , Marc A Suchard , Frederick A Matsen , Alexei Drummond

The kernel method is a potential approach to analyzing structured data such as sequences, trees, and graphs; however, unordered trees have not been investigated extensively. Kimura et al. (2011) proposed a kernel function for unordered…

Data Structures and Algorithms · Computer Science 2012-06-22 Daisuke Kimura , Hisashi Kashima