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Software architecture often consists of interconnected components dispersed across source code and other development artifacts, making visualization difficult without costly additional documentation. Although some tools can automatically…

Software Engineering · Computer Science 2024-07-26 Filipe F. Correia , Ricardo Ferreira , Paulo G. G Queiroz , Henrique Nunes , Matilde Barra , Duarte Figueiredo

State-of-the-art clustering algorithms use heuristics to partition the feature space and provide little insight into the rationale for cluster membership, limiting their interpretability. In healthcare applications, the latter poses a…

Machine Learning · Statistics 2018-12-04 Dimitris Bertsimas , Agni Orfanoudaki , Holly Wiberg

We propose a new outline for adaptive dictionary learning methods for sparse encoding based on a hierarchical clustering of the training data. Through recursive application of a clustering method, the data is organized into a binary…

Machine Learning · Computer Science 2020-06-11 Renato Budinich , Gerlind Plonka

Defects are common in software systems and can potentially cause various problems to software users. Different methods have been developed to quickly predict the most likely locations of defects in large code bases. Most of them focus on…

Software Engineering · Computer Science 2018-02-06 Hoa Khanh Dam , Trang Pham , Shien Wee Ng , Truyen Tran , John Grundy , Aditya Ghose , Taeksu Kim , Chul-Joo Kim

Treemaps have been widely applied to the visualization of hierarchical data. A treemap takes a weighted tree and visualizes its leaves in a nested planar geometric shape, with sub-regions partitioned such that each sub-region has an area…

Graphics · Computer Science 2023-09-01 Mehdi Behroozi , Reyhaneh Mohammadi , Cody Dunne

For a software system, its architecture is typically defined as the fundamental organization of the system incorporated by its components, their relationships to one another and their environment, and the principles governing their design.…

Software Engineering · Computer Science 2011-03-22 Robert Dabrowski , Krzysztof Stencel , Grzegorz Timoszuk

Hierarchical clustering is an important technique to organize big data for exploratory data analysis. However, existing one-size-fits-all hierarchical clustering methods often fail to meet the diverse needs of different users. To address…

Machine Learning · Computer Science 2020-09-22 Weikai Yang , Xiting Wang , Jie Lu , Wenwen Dou , Shixia Liu

Understanding the functional architecture of complex systems is crucial to illuminate their inner workings and enable effective methods for their prediction and control. Recent advances have introduced tools to characterise emergent…

Adaptation and Self-Organizing Systems · Physics 2024-06-06 Fernando E. Rosas , Bernhard C. Geiger , Andrea I Luppi , Anil K. Seth , Daniel Polani , Michael Gastpar , Pedro A. M. Mediano

With the rising quantity of textual data available in electronic format, the need to organize it become a highly challenging task. In the present paper, we explore a document organization framework that exploits an intelligent hierarchical…

Information Retrieval · Computer Science 2015-04-02 Rajendra Kumar Roul , Shubham Rohan Asthana , Sanjay Kumar Sahay

Distributed algorithms for solving coupled semidefinite programs (SDPs) commonly require many iterations to converge. They also put high computational demand on the computational agents. In this paper we show that in case the coupled…

Optimization and Control · Mathematics 2015-04-30 Sina Khoshfetrat Pakazad , Anders Hansson , Martin S. Andersen , Anders Rantzer

Modern software development methodologies include reuse of open source code. Reuse can be facilitated by architectural knowledge of the software, not necessarily provided in the documentation of open source software. The effort required to…

Software Engineering · Computer Science 2011-10-11 Eleni Constantinou , George Kakarontzas , Ioannis Stamelos

Hash codes are a very efficient data representation needed to be able to cope with the ever growing amounts of data. We introduce a random forest semantic hashing scheme with information-theoretic code aggregation, showing for the first…

Computer Vision and Pattern Recognition · Computer Science 2015-04-20 Qiang Qiu , Guillermo Sapiro , Alex Bronstein

Hierarchical clustering is a fundamental task often used to discover meaningful structures in data, such as phylogenetic trees, taxonomies of concepts, subtypes of cancer, and cascades of particle decays in particle physics. Typically…

Data Structures and Algorithms · Computer Science 2020-10-23 Craig S. Greenberg , Sebastian Macaluso , Nicholas Monath , Ji-Ah Lee , Patrick Flaherty , Kyle Cranmer , Andrew McGregor , Andrew McCallum

This paper presents an automated method for classifying source code changes during the software development process based on clustering of change metrics. The method consists of two steps: clustering of metric vectors computed for each code…

Software Engineering · Computer Science 2026-02-17 Evgenii Kniazev

The capability of classifying and clustering a desired set of data is an essential part of building knowledge from data. However, as the size and dimensionality of input data increases, the run-time for such clustering algorithms is…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-07-25 Hadi Mardani Kamali

Reconciling a gene tree with a species tree is an important task that reveals much about the evolution of genes, genomes, and species, as well as about the molecular function of genes. A wide array of computational tools have been devised…

Populations and Evolution · Quantitative Biology 2012-12-11 Yun Yu , Luay Nakhleh

We present a structural clustering algorithm for large-scale datasets of small labeled graphs, utilizing a frequent subgraph sampling strategy. A set of representatives provides an intuitive description of each cluster, supports the…

Databases · Computer Science 2016-10-03 Till Schäfer , Petra Mutzel

We introduce K-tree in an information retrieval context. It is an efficient approximation of the k-means clustering algorithm. Unlike k-means it forms a hierarchy of clusters. It has been extended to address issues with sparse…

Information Retrieval · Computer Science 2010-01-07 Christopher M. De Vries , Shlomo Geva

Software architecture refers to the high-level abstraction of a system including the configuration of the involved elements and the interactions and relationships that exist between them. Source codes can be easily built by referring to the…

Software Engineering · Computer Science 2021-06-08 Sanjay Thakare , Arvind W Kiwelekar

Clustering serves as a vital tool for uncovering latent data structures, and achieving both high accuracy and interpretability is essential. To this end, existing methods typically construct binary decision trees by solving mixed-integer…

Machine Learning · Computer Science 2026-02-17 Hayato Suzuki , Shunnosuke Ikeda , Yuichi Takano