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Estimation of epidemiological and population parameters from molecular sequence data has become central to the understanding of infectious disease dynamics. Various models have been proposed to infer details of the dynamics that describe…

Populations and Evolution · Quantitative Biology 2014-12-25 Alex Popinga , Tim Vaughan , Tanja Stadler , Alexei Drummond

We study the spread of stochastic SIR (Susceptible $\to$ Infectious $\to$ Recovered) epidemics in two types of structured populations, both consisting of schools and households. In each of the types, every individual is part of one school…

Physics and Society · Physics 2015-03-23 Tanneke Ouboter , Ronald Meester , Pieter Trapman

We present an SI epidemic model whereby a continuous variable captures variability in proliferative potential and resistance to infection among susceptibles. The occurrence of heritable, spontaneous changes in these phenotype and the…

Populations and Evolution · Quantitative Biology 2021-12-30 Tommaso Lorenzi , Andrea Pugliese , Mattia Sensi , Agnese Zardini

Social networks are an important infrastructure for information, viruses and innovations propagation. Since users behavior has influenced by other users activity, some groups of people would be made regard to similarity of users interests.…

Social and Information Networks · Computer Science 2013-09-30 Hamidreza Sotoodeh , Farshad Safaei , Arghavan Sanei , Elahe Daei

In this paper we study a susceptible infectious recovered (SIR) model with asymptomatic patients, contact tracing and isolation on a configuration network. Using degree based approximation, we derive a system of differential equations for…

Social and Information Networks · Computer Science 2022-12-20 Duan-Shin Lee , Ting-Zhe Liu , Ruhui Zhang , Cheng-Shang Chang

We consider a SIRD epidemic model for a population composed of two groups of individuals with asymmetric interactions, where the force of infection depends on the active (alive) population in each group, rather than on the total population,…

Populations and Evolution · Quantitative Biology 2026-01-23 Alison M. V. D. L. Melo , Matheus C. Santos

In this work, we study the epidemic SIR model on a system which takes into consideration face-to-face interaction networks. This approach has been used as prototype to describe people interactions in different kinds of social organizations…

The purpose of this study is to leverage modern technology (such as mobile or web apps in Beckman et al. (2014)) to enrich epidemiology data and infer the transmission of disease. Homogeneity related research on population level has been…

Applications · Statistics 2015-09-02 Kai Fan , Allison E. Aiello , Katherine A. Heller

We study a susceptible-infected-recovered (SIR) epidemic model on a network of $n$ interacting subpopulations. We analyze the transient and asymptotic behavior of the infection dynamics in each node of the network. In contrast to the…

Dynamical Systems · Mathematics 2024-03-18 Martina Alutto , Leonardo Cianfanelli , Giacomo Como , Fabio Fagnani

Identifying highly susceptible individuals in spreading processes is of great significance in controlling outbreaks. In this paper, we explore the susceptibility of people in susceptible-infectious-recovered (SIR) and rumor spreading…

Physics and Society · Physics 2015-05-20 Shaoting Tang , Xian Teng , Sen Pei , Shu Yan , Zhiming Zheng

We consider the estimation of densities in multiple subpopulations, where the available sample size in each subpopulation greatly varies. This problem occurs in epidemiology, for example, where different diseases may share similar…

Methodology · Statistics 2021-09-15 Jiaming Qiu , Xiongtao Dai , Zhengyuan Zhu

In this paper, we study the trajectory of a classic SIR epidemic on a family of dynamic random graphs of fixed size, whose set of edges continuously evolves over time. We set general infection and recovery times, and start the epidemic from…

Probability · Mathematics 2025-01-17 Marta Milewska , Remco van der Hofstad , Bert Zwart

Network--based epidemic models that account for heterogeneous contact patterns are extensively used to predict and control the diffusion of infectious diseases. We use census and survey data to reconstruct a geo--referenced and…

Social and Information Networks · Computer Science 2026-05-19 Alessandro Celestini , Francesca Colaiori , Stefano Guarino , Enrico Mastrostefano , Lena Rebecca Zastrow

In this paper we investigate the asymptotic behavior of some SIR models incorporating demography, bounded random transmission coefficient and a time-dependent vaccination strategy targeting the susceptible population. In this setting, we…

Populations and Evolution · Quantitative Biology 2025-10-27 Javier López-de-la-Cruz , Susana Merchán , Felipe Rivero , Javier Rodrigo

The shape of an epidemic wave in simple epidemic models applies to a homogeneous distribution of infected people in the population. In large inhomogeneous systems, at country-scale for instance, the wave shape is similar except for the…

Chemical Physics · Physics 2022-11-21 L. Vanel

Susceptible-Infected-Recovered (SIR) models have been used for decades to understand epidemic outbreak dynamics. We develop an SIR model specifically designed to study the effects of population behavior with respect to health and…

Populations and Evolution · Quantitative Biology 2023-08-03 Jasmin Nunuvero , Angelique Santiago , Moshe Cohen , Anca Radulescu

The viral load is known to be a chief predictor of the risk of transmission of infectious diseases. In this work, we investigate the role of the individuals' viral load in the disease transmission by proposing a new…

Adaptation and Self-Organizing Systems · Physics 2023-03-29 Rossella Della Marca , Nadia Loy , Andrea Tosin

One of the famous results of network science states that networks with heterogeneous connectivity are more susceptible to epidemic spreading than their more homogeneous counterparts. In particular, in networks of identical nodes it has been…

Physics and Society · Physics 2015-08-05 Hui Yang , Ming Tang , Thilo Gross

In this work, the aim is to study the spread of a contagious disease and information on a multilayer social system. The main idea is to find a criterion under which the adoption of the spreading information blocks or suppresses the epidemic…

Physics and Society · Physics 2021-03-16 Semra Gunduc

The compartmental models used to study epidemic spreading often assume the same susceptibility for all individuals, and are therefore, agnostic about the effects that differences in susceptibility can have on epidemic spreading. Here we…

Physics and Society · Physics 2014-03-12 Daniel Smilkov , Cesar A. Hidalgo , Ljupco Kocarev