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Predictive coding is a promising theoretical framework in neuroscience for understanding information transmission and perception. It posits that the brain perceives the external world through internal models and updates these models under…

Neurons and Cognition · Quantitative Biology 2022-09-07 Zhen-Ye Huang , Xin-Yi Fan , Jianwen Zhou , Hai-Jun Zhou

Color Appearance Models are biological networks that consist of a cascade of linear+nonlinear layers that modify the linear measurements at the retinal photo-receptors leading to an internal (nonlinear) representation of color that…

Neurons and Cognition · Quantitative Biology 2022-10-13 Jesus Malo

To understand possible strategies of temporal spike coding in the central nervous system, we study functional neuromimetic models of visual processing for static images. We will first present the retinal model which was introduced by Van…

Neurons and Cognition · Quantitative Biology 2007-05-23 Laurent Perrinet , Manuel Samuelides , Simon Thorpe

The primary visual cortex processes a large amount of visual information, however, due to its large receptive fields, when multiple stimuli fall within one receptive field, there are computational problems. To solve this problem, the visual…

Neurons and Cognition · Quantitative Biology 2019-04-18 Linda Wang

Over repeat presentations of the same stimulus, sensory neurons show variable responses. This "noise" is typically correlated between pairs of cells, and a question with rich history in neuroscience is how these noise correlations impact…

Neurons and Cognition · Quantitative Biology 2015-06-16 Yu Hu , Joel Zylberberg , Eric Shea-Brown

Visual perceptions often come with illusions whose physical origin are not well understood yet. The encoding of stochastic light intensity $x(t)$ into spikes with firing rate $r(t)$ at time $t$ is investigated in an experiment with retinas…

Neurons and Cognition · Quantitative Biology 2021-10-04 Qi-Rong Lin , Po-Yu Chou , C. K. Chan

We present a novel approach to neural response prediction that incorporates higher-order operations directly within convolutional neural networks (CNNs). Our model extends traditional 3D CNNs by embedding higher-order operations within the…

Computer Vision and Pattern Recognition · Computer Science 2025-05-13 Simone Azeglio , Victor Calbiague Garcia , Guilhem Glaziou , Peter Neri , Olivier Marre , Ulisse Ferrari

While a great deal is known about the way the retina processes simple stimuli, our understanding of how the retina processes natural stimuli is still limited. Here we highlight some of the challenges that remain to be addressed to…

Neurons and Cognition · Quantitative Biology 2025-09-03 Samuele Virgili , Olivier Marre

Our knowledge of the sensory world is encoded by neurons in sequences of discrete, identical pulses termed action potentials or spikes. There is persistent controversy about the extent to which the precise timing of these spikes is relevant…

Neurons and Cognition · Quantitative Biology 2007-05-23 Ilya Nemenman , Geoffrey D. Lewen , William Bialek , Rob R. de Ruyter van Steveninck

Neural correlations play a critical role in sensory information coding. They are of two kinds: signal correlations, when neurons have overlapping sensitivities, and noise correlations from network effects and shared noise. In experiments…

Neurons and Cognition · Quantitative Biology 2025-07-03 Gabriel Mahuas , Thomas Buffet , Olivier Marre , Ulisse Ferrari , Thierry Mora

Deep learning approaches to the segmentation of magnetic resonance images have shown significant promise in automating the quantitative analysis of brain images. However, a continuing challenge has been its sensitivity to the variability of…

Image and Video Processing · Electrical Eng. & Systems 2021-03-05 Dzung L. Pham , Yi-Yu Chou , Blake E. Dewey , Daniel S. Reich , John A. Butman , Snehashis Roy

Visual translation tolerance refers to our capacity to recognize objects over a wide range of different retinal locations. Although translation is perhaps the simplest spatial transform that the visual system needs to cope with, the extent…

Neurons and Cognition · Quantitative Biology 2020-12-09 Ryan Blything , Valerio Biscione , Ivan I. Vankov , Casimir J. H. Ludwig , Jeffrey S. Bowers

Recurrently connected neuron populations play key roles in sensory perception and memory storage across various brain regions. While these populations are often assumed to encode information through firing rates, this method becomes…

Neurons and Cognition · Quantitative Biology 2025-09-05 Mauricio Girardi-Schappo , Leonard Maler , André Longtin

We present an optimized conductance-based retina microcircuit simulator which transforms light stimuli into a series of graded and spiking action potentials through photo transduction. We use discrete retinal neuron blocks based on a…

Neurons and Cognition · Quantitative Biology 2020-01-16 Jason K. Eshraghian , Seungbum Baek , Wesley Thio , Yulia Sandamirskaya , Herbert H. C. Iu , Wei D. Lu

Understanding brain function, constructing computational models and engineering neural prosthetics require assessing two problems, namely encoding and decoding, but their relation remains controversial. For decades, the encoding problem has…

Neurons and Cognition · Quantitative Biology 2017-01-16 Hugo Gabriel Eyherabide

While traditional feed-forward filter models can reproduce the rate responses of retinal ganglion neurons to simple stimuli, they cannot explain why synchrony between spikes is much higher than expected by Poisson firing [6], and can be…

Neurons and Cognition · Quantitative Biology 2020-05-07 Christopher Warner , Friedrich T. Sommer

In this work we explore encoding strategies learned by statistical models of sensory coding in noisy spiking networks. Early stages of sensory communication in neural systems can be viewed as encoding channels in the information-theoretic…

Neurons and Cognition · Quantitative Biology 2020-06-30 M. E. Rule , M. Sorbaro , M. H. Hennig

Motion tracking is a challenge the visual system has to solve by reading out the retinal population. Here we recorded a large population of ganglion cells in a dense patch of salamander and guinea pig retinas while displaying a bar moving…

Neurons and Cognition · Quantitative Biology 2016-02-17 Olivier Marre , Vicente Botella-Soler , Kristina D. Simmons , Thierry Mora , Gašper Tkačik , Michael J. Berry

This work explores Liquid Time-Constant Networks (LTCs) and Closed-form Continuous-time Networks (CfCs) for modeling retinal ganglion cell activity in tiger salamanders across three datasets. Compared to a convolutional baseline and an…

Computer Vision and Pattern Recognition · Computer Science 2025-11-25 Kacper Dobek , Daniel Jankowski , Krzysztof Krawiec

We present a novel bio-inspired and dynamic coding scheme for static images. Our coder aims at reproducing the main steps of the visual stimulus processing in the mammalian retina taking into account its time behavior. The main novelty of…

Computer Vision and Pattern Recognition · Computer Science 2011-12-23 Khaled Masmoudi , Marc Antonini , Pierre Kornprobst