Related papers: Lower bounding edit distances between permutations

We define a statistic on the graph of commutation classes of a permutation of the symmetric group which is used to show that these graphs are equipped with a ranked poset structure, with a minimum and maximum. This characterization also…

We consider the number of passes a permutation needs to take through a stack if we only pop the appropriate output values and start over with the remaining entries in their original order. We define a permutation $\pi$ to be $k$-pass…

We revisit the classical problem of computing the \emph{contour tree} of a scalar field $f:\mathbb{M} \to \mathbb{R}$, where $\mathbb{M}$ is a triangulated simplicial mesh in $\mathbb{R}^d$. The contour tree is a fundamental topological…

On the string of finite length, a (genomic) transposition is defined as the operation of exchanging two consecutive substrings. The minimum number of transpositions needed to transform one into the other is the transposition distance, that…

There exists a bijection between one stack sortable permutations --permutations which avoid the pattern 231-- and planar trees. We define an edit distance between permutations which is coherent with the standard edit distance between trees.…

The variation in genome arrangements among bacterial taxa is largely due to the process of inversion. Recent studies indicate that not all inversions are equally probable, suggesting, for instance, that shorter inversions are more frequent…

A permutation $\pi$ over alphabet $\Sigma = {1,2,3,\ldots,n}$, is a sequence where every element $x$ in $\Sigma$ occurs exactly once. $S_n$ is the symmetric group consisting of all permutations of length $n$ defined over $\Sigma$. $I_n$ =…

The prefix exchange distance of a permutation is the minimum number of exchanges involving the leftmost element that sorts the permutation. We give new combinatorial proofs of known results on the distribution of the prefix exchange…

There is a deep connection between permutations and trees. Certain sub-structures of permutations, called sub-permutations, bijectively map to sub-trees of binary increasing trees. This opens a powerful tool set to study enumerative and…

The distance of a graph from being triangle-free is a fundamental graph parameter, counting the number of edges that need to be removed from a graph in order for it to become triangle-free. Its corresponding computational problem is the…

We study the connections between sorting and the binary search tree (BST) model, with an aim towards showing that the fields are connected more deeply than is currently appreciated. While any BST can be used to sort by inserting the keys…

Understanding the metric structure of permutation families is fundamental to combinatorics and has applications in social choice theory, bioinformatics, and coding theory. We study permutation families defined by restriction…

In this note we present a simplified and slightly generalized version of a lemma the authors published in 1987. The lemma as stated here asserts that if the order of a permutation of $n$ elements is greater than $n^{\alpha}$ then some…

Associate to each sequence $A$ of integers (intending to represent packet IDs) a sequence of positive integers of the same length ${\mathcal M}(A)$. The $i$'th entry of ${\mathcal M}(A)$ is the size (at time $i$) of the smallest buffer…

Given a rooted tree and a ranking of its leaves, what is the minimum number of inversions of the leaves that can be attained by ordering the tree? This variation of the problem of counting inversions in arrays originated in mathematical…

Tree rotations (left and right) are basic local deformations allowing to transform between two unlabeled binary trees of the same size. Hence, there is a natural problem of practically finding such transformation path with low number of…

A permutation may be represented by a collection of paths in the plane. We consider a natural class of such representations, which we call tangles, in which the paths consist of straight segments at 45 degree angles, and the permutation is…

The problem of comparing trees representing the evolutionary histories of cancerous tumors has turned out to be crucial, since there is a variety of different methods which typically infer multiple possible trees. A departure from the…

We develop a new technique for constructing sparse graphs that allow us to prove near-linear lower bounds on the round complexity of computing distances in the CONGEST model. Specifically, we show an $\widetilde{\Omega}(n)$ lower bound for…

We consider the problem of upper bounding the number of circular transpositions needed to sort a permutation. It is well known that any permutation can be sorted using at most $n(n-1)/2$ adjacent transpositions. We show that, if we allow…