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Most infectious diseases including more than half of known human pathogens are not restricted to just one host, yet much of the mathematical modeling of infections has been limited to a single species. We investigate consequences of a…

Populations and Evolution · Quantitative Biology 2017-08-30 Sergei Maslov , Kim Sneppen

According to the competitive exclusion principle, in a finite ecosystem, extinction occurs naturally when two or more species compete for the same resources. An important question that arises is: when coexistence is not possible, which…

Populations and Evolution · Quantitative Biology 2017-08-16 Marcelo Martins de Oliveira , Ronald Dickman

We investigate the formation of stable ecological networks where many species share the same resource. We show that such stable ecosystem naturally occurs as a result of extinctions. We obtain an analytical relation for the number of…

Populations and Evolution · Quantitative Biology 2017-04-05 V. Kozlov , S. Vakulenko , U. Wennergren

The Allee effect describes a decline in population fitness at low densities, potentially leading to extinction. In predator-prey systems, an emergent Allee effect can arise due to interactions such as density-dependent maturation rates and…

Populations and Evolution · Quantitative Biology 2025-03-25 Carlos Granados , Leon A. Valencia

Here we present extinction, extirpation and coexistence conditions where / when two communities combine. We consider one specific model where two communities coalesce, and another model where the communities coexist side by side, blending…

Populations and Evolution · Quantitative Biology 2025-01-14 Martin Heidelman , Dervis Can Vural

Stochastic chemical reaction or population dynamics in finite systems often terminates in an absorbing state. Yet in large spatially extended systems, the time to reach species extinction (or fixation) becomes exceedingly long. Tuning…

Populations and Evolution · Quantitative Biology 2025-11-17 Kenneth A. V. Distefano , Sara Shabani , Uwe C. Täuber

The "Kill the Winner" hypothesis is an attempt to address the problem of diversity in biology. It argues that host-specific predators control the population of each prey, preventing a winner from emerging and thus maintaining the…

Biological Physics · Physics 2018-01-03 Chi Xue , Nigel Goldenfeld

Simulations of the coevolution of many interacting species are performed using the Webworld model. The model has a realistic set of predator-prey equations that describe the population dynamics of the species for any structure of the food…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Christopher Quince , Paul G. Higgs , Alan J. McKane

The survival of natural populations may be greatly affected by environmental conditions that vary in space and time. We look at a population residing in two locations (patches) coupled by migration, in which the local conditions fluctuate…

Statistical Mechanics · Physics 2021-08-11 Tal Agranov , Guy Bunin

When three species compete cyclically in a well-mixed, stochastic system of $N$ individuals, extinction is known to typically occur at times scaling as the system size $N$. This happens, for example, in rock-paper-scissors games or…

Physics and Society · Physics 2019-02-20 Kevin E. Bassler , Erwin Frey , R. K. P. Zia

A simulation model of a population having internal (genetic) structure is presented. The population is subject to selection pressure coming from the environment which is the same in the whole system but changes in time. Reproduction has a…

Adaptation and Self-Organizing Systems · Physics 2012-08-31 Andrzej Pekalski , Marcel Ausloos

Individual species may experience diverse outcomes, from prosperity to extinction, in an ecological community subject to external and internal variations. Despite the wealth of theoretical results derived from random matrix ensembles, a…

Populations and Evolution · Quantitative Biology 2024-06-12 Andrus Giraldo , Deok-Sun Lee

Our study focuses on analyzing the behavior of a stochastic predator-prey model with a time delay and logistic growth of prey, influenced by L\'{e}vy noise. Initially, we establish the existence, uniqueness, and boundedness of a positive…

Dynamical Systems · Mathematics 2023-04-26 Jaouad Danane , Delfim F. M. Torres

Two mathematical models of macroevolution are studied. These models have population dynamics at the species level, and mutations and extinction of species are also included. The population dynamics are updated by difference equations with…

Populations and Evolution · Quantitative Biology 2014-04-16 Yohsuke Murase , Takashi Shimada , Nobuyasu Ito , Per Arne Rikvold

In recent years there has been a growing interest in the study of the dynamics of stochastic populations. A key question in population biology is to understand the conditions under which populations coexist or go extinct. Theoretical and…

Probability · Mathematics 2018-06-04 Alexandru Hening , Dang H. Nguyen

We study the dynamics of a second-order difference equation that is derived from a planar Ricker model of two-stage (e.g. adult, juvenile) biological populations. We obtain sufficient conditions for global convergence to zero in the…

Dynamical Systems · Mathematics 2017-02-14 N. Lazaryan , H. Sedaghat

We consider excursions for a class of stochastic processes describing a population of discrete individuals experiencing density-limited growth, such that the population has a finite carrying capacity and behaves qualitatively like the…

Populations and Evolution · Quantitative Biology 2017-04-10 Todd L. Parsons

Models of coordinated behavior of populations living in the same environment are introduced for the cases when they either compete with each other, or they both gain by mutual interactions, or finally when one hunts the other one. The…

Dynamical Systems · Mathematics 2014-03-19 D. Melchionda , E. Pastacaldi , C. Perri , E. Venturino

Extinction of an epidemic or a species is a rare event that occurs due to a large, rare stochastic fluctuation. Although the extinction process is dynamically unstable, it follows an optimal path that maximizes the probability of…

Biological Physics · Physics 2010-03-25 Eric Forgoston , Simone Bianco , Leah B. Shaw , Ira B. Schwartz

We study the effect of speciation, i.e. the introduction of new species through evolution into communities, in the setting of predator-prey systems. Predator-prey dynamics is classically well modeled by Lotka-Volterra equations, also when…

Populations and Evolution · Quantitative Biology 2025-03-20 Christian Hamster , Jorik Schaap , Peter van Heijster , Joshua Dijksman