Related papers: Tractability results for the Double-Cut-and-Join c…
Let $P$ be a set of $n\geq 3$ points in general position in the plane. The edge disjointness graph $D(P)$ of $P$ is the graph whose vertices are all the closed straight line segments with endpoints in $P$, two of which are adjacent in…
We study the enumeration of answers to Unions of Conjunctive Queries (UCQs) with optimal time guarantees. More precisely, we wish to identify the queries that can be solved with linear preprocessing time and constant delay. Despite the…
We study irreversible dimer nucleation on top of terraces during epitaxial growth in one and two dimensions, for all values of the step-edge barrier. The problem is solved exactly by transforming it into a first passage problem for a random…
We study a class of integer bilevel programs with second-order cone constraints at the upper-level and a convex-quadratic objective function and linear constraints at the lower-level. We develop disjunctive cuts (DCs) to separate…
This paper deals with a hybrid joint diagonalization (JD) problem considering both Hermitian and transpose congruences. Such problem can be encountered in certain non-circular signal analysis applications including blind source separation.…
In the Directed Disjoint Paths problem, we are given a digraph $D$ and a set of requests $\{(s_1, t_1), \ldots, (s_k, t_k)\}$, and the task is to find a collection of pairwise vertex-disjoint paths $\{P_1, \ldots, P_k\}$ such that each…
We generalize the joints problem to sets of varieties and prove almost sharp bound on the number of joints. As a special case, given a set of $N$ $2$-planes in $\mathbb{R}^6$, the number of points at which three $2$-planes intersect and…
In this letter we study the NP-complete vertex cover problem on finite connectivity random graphs. When the allowed size of the cover set is decreased, a discontinuous transition in solvability and typical-case complexity occurs. This…
Finding paths in graphs is a fundamental graph-theoretic task. In this work, we we are concerned with finding a path with some constraints on its length and the number of vertices neighboring the path, that is, being outside of and incident…
In the Disjoint Shortest Paths problem one is given a graph $G$ and a set $\mathcal{T}=\{(s_1,t_1),\dots,(s_k,t_k)\}$ of $k$ vertex pairs. The question is whether there exist vertex-disjoint paths $P_1,\dots,P_k$ in $G$ so that each $P_i$…
Several important decision problems on conjunctive queries (CQs) are NP-complete in general but become tractable, and actually highly parallelizable, if restricted to acyclic or nearly acyclic queries. Examples are the evaluation of Boolean…
In the Dominated Cluster Deletion problem, we are given an undirected graph $G$ and integers $k$ and $d$ and the question is to decide whether there exists a set of at most $k$ vertices whose removal results in a graph in which each…
Phylogenetic reconciliation seeks to explain host-symbiont co-evolution by mapping parasite trees onto host trees through events such as cospeciation, duplication, host switching, and loss. Finding an optimal reconciliation that ensures…
In this work, we study the Biclique-Free Vertex Deletion problem: Given a graph $G$ and integers $k$ and $i \le j$, find a set of at most $k$ vertices that intersects every (not necessarily induced) biclique $K_{i, j}$ in $G$. This is a…
We introduce a new -as far as we know- problem, according to which we are asked to match sequences of two digits in matrices having entries among those two digits (but others too) and prove that this problem is NP-complete
Consider a connected graph $G$ and let $T$ be a spanning tree of $G$. Every edge $e \in G-T$ induces a cycle in $T \cup \{e\}$. The intersection of two distinct such cycles is the set of edges of $T$ that belong to both cycles. The MSTCI…
In phylogenetic networks, it is desirable to estimate edge lengths in substitutions per site or calendar time. Yet, there is a lack of scalable methods that provide such estimates. Here we consider the problem of obtaining edge length…
In the Metric Dimension problem, one asks for a minimum-size set $R$ of vertices such that for any pair of vertices of the graph, there is a vertex from $R$ whose two distances to the vertices of the pair are distinct. This problem has…
A graph is distance-hereditary if for any pair of vertices, their distance in every connected induced subgraph containing both vertices is the same as their distance in the original graph. The Distance-Hereditary Vertex Deletion problem…
Given two triangulations of a convex polygon, computing the minimum number of flips required to transform one to the other is a long-standing open problem. It is not known whether the problem is in P or NP-complete. We prove that two…