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The size and shape of a large variety of polymeric particles, including biological cells, star polymers, dendrimes, and microgels, depend on the applied stresses as the particles are extremely soft. In high-density suspensions these…

Statistical Mechanics · Physics 2018-04-11 Yan-Wei Li , Massimo Pica Ciamarra

The vertex model is widely used to describe the dynamics of epithelial tissues, because of its simplicity and versatility and the direct inclusion of biophysical parameters. Here, it is shown that quite generally, when cells modify their…

Soft Condensed Matter · Physics 2020-11-25 Fernanda Perez-Verdugo , Jean-Francois Joanny , Rodrigo Soto

Cell walls define a cell shape in bacteria. They are rigid to resist large internal pressures, but remarkably plastic to adapt to a wide range of external forces and geometric constraints. Currently, it is unknown how bacteria maintain…

Soft Condensed Matter · Physics 2014-05-01 Ariel Amir , Farinaz Babaeipour , Dustin B. McIntosh , David R. Nelson , Suckjoon Jun

Rubber components and soft tissues are often subjected to large bending deformations "in service". The circumferential line elements on the inner face of a bent block can contract up to a certain critical stretch ratio lambda_cr (say)…

Soft Condensed Matter · Physics 2013-02-22 Michel Destrade , Aisling Ni Annaidh , Ciprian Coman

Bilayer lipid membranes [BLMs] are an essential component of all biological systems, forming a functional barrier for cells and organelles from the surrounding environment. The lipid molecules that form membranes contain both permanent and…

Biological Physics · Physics 2015-03-17 Richard J. Bingham , Peter D. Olmsted , Stephen W. Smye

Irreversibility, in which a transient perturbation leaves a system in a new state, is an emergent property in systems of interacting entities. This property has well-established implications in statistical physics but remains underexplored…

Molecular Networks · Quantitative Biology 2024-09-25 Yi Zhao , Thomas P. Wytock , Kimberly A. Reynolds , Adilson E. Motter

Red blood cells (RBCs) from the cord blood of newborn infants have distinctive functions for fetal and infant development. To systematically investigate the biophysical characteristics of individual cord RBCs in newborn infants, a…

The flow behavior of blood in microvessels is directly associated with tissue perfusion and oxygen delivery. Current efforts on modeling blood flow have primarily focused on the flow properties of blood with red blood cells (RBCs) having a…

Soft Condensed Matter · Physics 2024-06-03 Wei Chien , Gerhard Gompper , Dmitry A. Fedosov

Biological cells are able to generate intricate structures and respond to external stimuli, sculpting their membrane from within. Simplified biomimetic systems can aid in understanding the principles which govern these shape changes and…

Cell deformability is an essential determinant for tissue-scale mechanical nature, such as fluidity and rigidity, and is thus crucial for understanding tissue homeostasis and stable developmental processes. However, numerical simulations…

Tissues and Organs · Quantitative Biology 2023-03-08 Nen Saito , Shuji Ishihara

Motivated by the complex rheological behaviors observed in small/micro scale blood vessels, such as the Fahraeus effect, plasma-skimming, shear-thinning, etc., we develop a non-linear suspension model for blood. The viscosity is assumed to…

Fluid Dynamics · Physics 2018-12-26 Wei-Tao Wu , Nadine Aubry , James F. Antaki , Mehrdad Massoudi

By employing a series of massively parallel ab-initio simulations, we study how optical forces act on biological matter subject to morphological disease. As a representative case study, we here consider the case of Plasmodium Falciparum on…

Optics · Physics 2016-05-17 Juan Sebastian Totero Gongora , Andrea Fratalocchi

Cancer is a disease of cellular regulation, often initiated by genetic mutation within cells, and leading to a heterogeneous cell population within tissues. In the competition for nutrients and growth space within the tumors the phenotype…

Populations and Evolution · Quantitative Biology 2017-08-08 András Szabó , Roeland M. H. Merks

The impact of cell segregation and margination in blood disorders on microcirculatory hemodynamics within bifurcated vessels are physiologically significant, yet poorly understood. This study presents a comprehensive computational…

Biological Physics · Physics 2025-01-09 Xiaopo Cheng , Christina Caruso , Wilbur A. Lam , Michael D. Graham

We set up the statistical mechanics for a nearly flat, thermally equilibrated fluid membrane, attached to an elastic network through one of its sides. We predict that the resulting structural (inversion) asymmetry of the membrane, notably…

Soft Condensed Matter · Physics 2016-10-07 Tirthankar Banerjee , Niladri Sarkar , Abhik Basu

Babesia microti causes emergency human babesiosis. However, little is known about the alterations in B. microti invaded red blood cells (Bm-RBCs) at the individual cell level. Through quantitative phase imaging techniques based on laser…

As an injury heals, an embryo develops, or a carcinoma spreads, epithelial cells systematically change their shape. In each of these processes cell shape is studied extensively, whereas variation of shape from cell-to-cell is dismissed most…

The unique ability of a red blood cell to flow through extremely small microcapillaries depends on the viscoelastic properties of its membrane. Here, we study in vitro the response time upon flow startup exhibited by red blood cells…

Soft Condensed Matter · Physics 2016-05-25 Gaël Prado , Alexander Farutin , Chaouqi Misbah , Lionel Bureau

A thin-walled tube, e.g., a drinking straw, manifests an instability when bent by localizing the curvature change in a small region. This instability has been extensively studied since the seminal work of Brazier nearly a century ago.…

Soft Condensed Matter · Physics 2022-02-03 Luyi Qiu , John W. Hutchinson , Ariel Amir

The nature of blood as a suspension of red blood cells makes computational hemodynamics a demanding task. Our coarse-grained blood model, which builds on a lattice Boltzmann method for soft particle suspensions, enables the study of the…

Soft Condensed Matter · Physics 2011-09-16 Florian Janoschek , Francesca Mancini , Jens Harting , Federico Toschi
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