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A big challenge in branch and bound lies in identifying the optimal node within the search tree from which to proceed. Current state-of-the-art selectors utilize either hand-crafted ensembles that automatically switch between naive sub-node…

Machine Learning · Computer Science 2024-06-06 Alexander Mattick , Christopher Mutschler

We study the fundamental question of how likely it is that two randomly chosen trees are isomorphic to each other for different models of random trees. We show that the probability decays exponentially for rooted labeled trees as well as…

Probability · Mathematics 2023-04-11 Christoffer Olsson

The problem of comparing trees representing the evolutionary histories of cancerous tumors has turned out to be crucial, since there is a variety of different methods which typically infer multiple possible trees. A departure from the…

Data Structures and Algorithms · Computer Science 2019-04-03 Giulia Bernardini , Paola Bonizzoni , Gianluca Della Vedova , Murray Patterson

We define, analyze, and give efficient algorithms for two kinds of distance measures for rooted and unrooted phylogenies. For rooted trees, our measures are based on the topologies the input trees induce on triplets; that is, on…

Data Structures and Algorithms · Computer Science 2009-06-30 Mukul S. Bansal , Jianrong Dong , David Fernández-Baca

Are biological networks different from other large complex networks? Both large biological and non-biological networks exhibit power-law graphs (number of nodes with degree k, N(k) ~ k-b) yet the exponents, b, fall into different ranges.…

Condensed Matter · Physics 2007-05-23 Fan Chung , Linyuan Lu , T. Gregory Dewey , David J. Galas

We study the task of selecting $k$ nodes, in a social network of size $n$, to seed a diffusion with maximum expected spread size, under the independent cascade model with cascade probability $p$. Most of the previous work on this problem…

Social and Information Networks · Computer Science 2022-05-24 Dean Eckles , Hossein Esfandiari , Elchanan Mossel , M. Amin Rahimian

Many network applications are based on binary-state networks, where each component has one of two states: success or failure. Efficient algorithms to evaluate binary-state network reliability are continually being developed. Reliability…

Networking and Internet Architecture · Computer Science 2020-12-01 Wei-Chang Yeh

We provide time- and sample-efficient algorithms for learning and testing latent-tree Ising models, i.e. Ising models that may only be observed at their leaf nodes. On the learning side, we obtain efficient algorithms for learning a…

Machine Learning · Computer Science 2023-07-11 Davin Choo , Yuval Dagan , Constantinos Daskalakis , Anthimos Vardis Kandiros

For a pair consisting of a gene tree and a species tree, the ancestral configurations at an internal node of the species tree are the distinct sets of gene lineages that can be present at that node. Ancestral configurations appear in…

Combinatorics · Mathematics 2020-06-17 Filippo Disanto , Michael Fuchs , Ariel R. Paningbatan , Noah A. Rosenberg

We examine a discrete random recursive tree growth process that, at each time step, either adds or deletes a node from the tree with probability $p$ and $1-p$, respectively. Node addition follows the usual uniform attachment model. For node…

Probability · Mathematics 2021-08-03 Arnold Saunders

We study search trees with 2-way comparisons (2WCST's), which involve separate less-than and equal-to tests in their nodes, each test having two possible outcomes, yes and no. These trees have a much subtler structure than standard search…

Data Structures and Algorithms · Computer Science 2023-12-08 Sunny Atalig , Marek Chrobak

We discuss a notion of convergence for binary trees that is based on subtree sizes. In analogy to recent developments in the theory of graphs, posets and permutations we investigate some general aspects of the topology, such as a…

Combinatorics · Mathematics 2024-02-14 Rudolf Grübel

Tree-based phylogenetic networks, which may be roughly defined as leaf-labeled networks built by adding arcs only between the original tree edges, have elegant properties for modeling evolutionary histories. We answer an open question of…

The subtrees and BC-subtrees (subtrees where any two leaves are at even distance apart) have been extensively studied in recent years. Such structures, under special constraints on degrees, have applications in many fields. Through an…

Combinatorics · Mathematics 2021-10-08 Yu Yang , Xiao-xiao Li , Meng-yuan Jin , Long Li , Hua Wang , Xiao-Dong Zhang

Decision trees are interpretable models that are well-suited to non-linear learning problems. Much work has been done on extending decision tree learning algorithms with differential privacy, a system that guarantees the privacy of samples…

Machine Learning · Computer Science 2023-10-13 Daniël Vos , Jelle Vos , Tianyu Li , Zekeriya Erkin , Sicco Verwer

The adjacency and Laplacian matrices of complex networks with two species of nodes are studied and the spectral density is evaluated by using the replica method in statistical physics. The network nodes are classified into two species (A…

Statistical Mechanics · Physics 2015-06-11 Taro Nagao

Graph searches and their respective search trees are widely used in algorithmic graph theory. The problem whether a given spanning tree can be a graph search tree has been considered for different searches, graph classes and search tree…

Discrete Mathematics · Computer Science 2023-07-17 Robert Scheffler

Random forests on the one hand, and neural networks on the other hand, have met great success in the machine learning community for their predictive performance. Combinations of both have been proposed in the literature, notably leading to…

Machine Learning · Computer Science 2021-10-15 Ludovic Arnould , Claire Boyer , Erwan Scornet , Sorbonne Lpsm

Adaptive binary search trees are a fundamental data structure for organizing hierarchical information. Their ability to dynamically adjust to access patterns makes them particularly valuable for building responsive and efficient networked…

Data Structures and Algorithms · Computer Science 2025-07-29 Maryam Shiran

We develop combinatorial methods for computing the rotation distance between binary trees, i.e., equivalently, the flip distance between triangulations of a polygon. As an application, we prove that, for each n, there exist size n trees at…

Combinatorics · Mathematics 2009-01-19 Patrick Dehornoy