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The influence of stable and unstable stratification on the amplification of coherent structures in turbulent channel flows is investigated by computing the linear response to stochastic forcing. The responses to momentum and thermal forcing…

Fluid Dynamics · Physics 2023-06-16 Carlo Cossu

Many recent generative models make use of neural networks to transform the probability distribution of a simple low-dimensional noise process into the complex distribution of the data. This raises the question of whether biological networks…

Neural and Evolutionary Computing · Computer Science 2018-02-07 Hesham Mostafa , Gert Cauwenberghs

Assuming noisy feedback channels, this paper investigates the data transmission efficiency and robustness of different automatic repeat request (ARQ) schemes using adaptive power allocation. Considering different block-fading channel…

Information Theory · Computer Science 2013-10-16 Behrooz Makki , Alexandre Graell i Amat , Thomas Eriksson

Networks of excitatory and inhibitory neurons display asynchronous irregular (AI) states, where the activities of the two populations are balanced. At the single cell level, it was shown that neurons subject to balanced and noisy synaptic…

Neurons and Cognition · Quantitative Biology 2016-11-29 Zahara Girones , Alain Destexhe

Identity, response to external stimuli, and spatial architecture of a living system are central topics of molecular biology. Presently, they are largely seen as a result of the interplay between a gene repertoire and the regulatory…

Molecular Networks · Quantitative Biology 2007-05-23 M. Cosentino Lagomarsino , P. Jona , B. Bassetti

Constraints placed upon the phenotypes of organisms result from their interactions with the environment. Over evolutionary timescales, these constraints feed back onto smaller molecular subnetworks comprising the organism. The evolution of…

Molecular Networks · Quantitative Biology 2015-06-10 Cameron Smith , Ximo Pechuan , Raymond S. Puzio , Daniel Biro , Aviv Bergman

While noise is generally associated with uncertainties and often has a negative connotation in engineering, living organisms have evolved to adapt to (and even exploit) such uncertainty to ensure the survival of a species or implement…

Molecular Networks · Quantitative Biology 2022-09-29 Corentin Briat , Mustafa Khammash

In many biological networks the responses of individual elements are ambiguous. We consider a scenario in which many sensors respond to a shared signal, each with limited information capacity, and ask that the outputs together convey as…

Biological Physics · Physics 2025-12-30 Marianne Bauer , William Bialek

We describe the dynamics of a simple adaptive network. The network architecture evolves to a number of disconnected components on which the dynamics is characterized by the possibility of differently synchronized nodes within the same…

Adaptation and Self-Organizing Systems · Physics 2015-05-28 V. Botella-Soler , P. Glendinning

In this paper, we present an approach for designing correct-by-design controllers for cyber-physical systems composed of multiple dynamically interconnected uncertain systems. We consider networked discrete-time uncertain nonlinear systems…

Systems and Control · Electrical Eng. & Systems 2023-09-06 Oliver Schön , Birgit van Huijgevoort , Sofie Haesaert , Sadegh Soudjani

Living systems operate in a critical dynamical regime -- between order and chaos -- where they are both resilient to perturbation, and flexible enough to evolve. To characterize such critical dynamics, the established 'structural theory' of…

Molecular Networks · Quantitative Biology 2022-01-28 Santosh Manicka , Manuel Marques-Pita , Luis M. Rocha

We report the experimental verification of noise-enhanced logic behaviour in an electronic analog of a synthetic genetic network, composed of two repressors and two constitutive promoters. We observe good agreement between circuit…

Biological Physics · Physics 2014-02-19 Edward H. Hellen , Syamal K. Dana , Jurgen Kurths , Elizabeth Kehler , Sudeshna Sinha

In this work we explore encoding strategies learned by statistical models of sensory coding in noisy spiking networks. Early stages of sensory communication in neural systems can be viewed as encoding channels in the information-theoretic…

Neurons and Cognition · Quantitative Biology 2020-06-30 M. E. Rule , M. Sorbaro , M. H. Hennig

At functional scales, cortical behavior results from the complex interplay of a large number of excitable cells operating in noisy environments. Such systems resist to mathematical analysis, and computational neurosciences have largely…

Neurons and Cognition · Quantitative Biology 2014-03-05 Mathieu Galtier , Jonathan Touboul

Networks of coupled phase oscillators are one of the most studied dynamical systems with numerous applications in physics, chemistry, biology, and engineering. Their behaviour is often characterized by the emergence of various partially…

Pattern Formation and Solitons · Physics 2026-02-27 Oleh E. Omel'chenko

We consider a real-time communication system with noisy feedback consisting of a Markov source, a forward and a backward discrete memoryless channels, and a receiver with finite memory. The objective is to design an optimal communication…

Information Theory · Computer Science 2007-09-25 Aditya Mahajan , Demosthenis Teneketzis

Gene expression dynamics satisfying given input-output relationships were investigated by evolving the networks for an optimal response. We found three types of networks and corresponding dynamics, depending on the sensitivity of gene…

Molecular Networks · Quantitative Biology 2018-12-26 Masayo Inoue , Kunihiko Kaneko

We describe a simple adaptive network of coupled chaotic maps. The network reaches a stationary state (frozen topology) for all values of the coupling parameter, although the dynamics of the maps at the nodes of the network can be…

Adaptation and Self-Organizing Systems · Physics 2015-06-19 V. Botella-Soler , P. Glendinning

A stochastic reaction-diffusion model is studied on a networked support. In each patch of the network two species are assumed to interact following a non-normal reaction scheme. When the interaction unit is replicated on a directed linear…

Collective dynamics result from interactions among noisy dynamical components. Examples include heartbeats, circadian rhythms, and various pattern formations. Because of noise in each component, collective dynamics inevitably involve…

Biological Physics · Physics 2010-09-09 Naoki Masuda , Yoji Kawamura , Hiroshi Kori