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In the framework of the relativistic mean field model with Thomas-Fermi approximation, we study the structures of low density nuclear matter in a three-dimensional geometry with reflection symmetry. The numerical accuracy and efficiency are…
We propose a chiral random matrix model which properly incorporates the flavor-number dependence of the phase transition owing to the \UA(1) anomaly term. At finite temperature, the model shows the second-order phase transition with…
In this paper we study $\gamma$-structures filtered by topological genus. $\gamma$-structures are a class of RNA pseudoknot structures that plays a key role in the context of polynomial time folding of RNA pseudoknot structures. A…
Hidden symmetries of non-relativistic $\mathfrak{so} (2,1)\cong \mathfrak{sl}(2, {\mathbb R})$ invariant systems in a cosmic string background are studied using the conformal bridge transformation. Geometric properties of this background…
We investigate the geometry of a critical system undergoing a second order thermal phase transition. Using a local description for the dynamics characterizing the system at the critical point T=Tc, we reveal the formation of clusters with…
We study certain phase transitions of branching random walks (BRW) on Cayley graphs of free products. The aim of this paper is to compare the size and structural properties of the trace, i.e., the subgraph that consists of all edges and…
We report on spontaneous rotational symmetry breaking in a minimal model of complex macromolecules with branches and cycles. The transition takes place as the strength of the self-repulsion is increased. At the transition point, the density…
Despite great successes in the study of gapped phases, a comprehensive understanding of the gapless phases and their transitions is still under developments. In this paper, we study a general phenomenon in the space of (1+1)$d$ critical…
In the critical beta-splitting model of a random $n$-leaf rooted tree, clades are recursively split into sub-clades, and a clade of $m$ leaves is split into sub-clades containing $i$ and $m-i$ leaves with probabilities $\propto 1/(i(m-i))$.…
Loops are abundant in native RNA structures and proliferate close to the unfolding transition. By including a statistical weight ~ l^{-c} for loops of length l in the recursion relation for the partition function, we show that the…
We introduce and study a model of percolation with constant freezing (PCF) where edges open at constant rate 1, and clusters freeze at rate \alpha independently of their size. Our main result is that the infinite volume process can be…
We study a simple model of DNA evolution in a growing population of cells. Each cell contains a nucleotide sequence which randomly mutates at cell division. Cells divide according to a branching process. Following typical parameter values…
Consider a family $\mathcal F$ of $C_{2r+1}$-free graphs, where $r\geq 2$. Suppose that each graph in $\mathcal F$ has minimum degree linear in its number of vertices. Thomassen showed that such a family has bounded chromatic number, or,…
We describe a dynamic programming algorithm for predicting optimal RNA secondary structure, including pseudoknots. The algorithm has a worst case complexity of ${\cal O}(N^6)$ in time and ${\cal O}(N^4)$ in storage. The description of the…
We study a random fragmentation process and its associated random tree. The process has earlier been studied by Dean and Majumdar (J. Phys. A: Math. Gen., vol. 35, L501--L507), who found a phase transition: the number of fragmentations is…
We consider the possibility of topological quantum phase transitions of ultracold fermions in optical lattices, which can be studied as a function of interaction strength or atomic filling factor (density). The phase transitions are…
We analyze the asymptotic number and typical structure of claw-free graphs at constant edge densities. The first of our main results is a formula for the asymptotics of the logarithm of the number of claw-free graphs of edge density $\gamma…
Recent experiments discovered an order-disorder transition occuring at low temperatures in large unit 1/1 cell cubic approximants of the stable Cd-based binary alloy quasicrystals. The transition is related to correlations among…
This article investigates the pseudo transitions of the Blume-Capel model on two-dimensional finite-size lattices. By employing the Wang-Landau sampling method and microcanonical inflection point analysis, we identified the positions of…
Consider a random word $X^n=(X_1,\ldots ,X_n)$ in an alphabet consisting of $4$ letters, with the letters viewed either as $A$, $U$, $G$ and $C$ (i.e., nucleotides in an RNA sequence) or $\alpha$, $\bar{\alpha}$, $\beta$ and $\bar{\beta}$…