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Sustainable aviation fuels have the potential for reducing emissions and environmental impact. To help identify viable sustainable aviation fuels and accelerate research, several machine learning models have been developed to predict…

Chemical Physics · Physics 2024-08-06 Ana E. Comesana , Sharon S. Chen , Kyle E. Niemeyer , Vi H. Rapp

The rapid mutation of the influenza virus threatens public health. Reassortment among viruses with different hosts can lead to a fatal pandemic. However, it is difficult to detect the original host of the virus during or after an outbreak…

Computation and Language · Computer Science 2023-11-21 Yanhua Xu , Dominik Wojtczak

This report is based on the work in (1). We first review definitions and notation developped there and provide derivations for the exact mathematical description of an SIS epidemic on a hypergraph. We then generalise the work in (1) to a…

Populations and Evolution · Quantitative Biology 2022-01-03 Rohan Nuckchady

The next decade will be an exciting period for solar astrophysics, as new ground- and space-based instrumentation will provide unprecedented observations of the solar atmosphere and heliosphere. The synergy between modeling effort and…

Instrumentation and Methods for Astrophysics · Physics 2021-01-11 Serena Criscuoli , Maria Kazachenko , Irina Kitashvili , Alexander Kosovichev , Valentín Martínez Pillet , Gelu Nita , Viacheslav Sadykov , Alan Wray

Tethered particle motion experiments are versatile single-molecule techniques enabling one to address in vitro the molecular properties of DNA and its interactions with various partners involved in genetic regulations. These techniques…

Biological Physics · Physics 2019-09-05 Manoel Manghi , Nicolas Destainville , Annaël Brunet

Clustering is part of unsupervised analysis methods that consist in grouping samples into homogeneous and separate subgroups of observations also called clusters. To interpret the clusters, statistical hypothesis testing is often used to…

Methodology · Statistics 2022-10-25 Benjamin Hivert , Denis Agniel , Rodolphe Thiébaut , Boris P Hejblum

Effective representation learning of electronic health records is a challenging task and is becoming more important as the availability of such data is becoming pervasive. The data contained in these records are irregular and contain…

Machine Learning · Computer Science 2020-05-05 Sajad Darabi , Mohammad Kachuee , Shayan Fazeli , Majid Sarrafzadeh

Histopathological images (HIs) are the gold standard for evaluating some types of tumors for cancer diagnosis. The analysis of such images is not only time and resource consuming, but also very challenging even for experienced pathologists,…

Computer Vision and Pattern Recognition · Computer Science 2021-02-09 Jonathan de Matos , Steve Tsham Mpinda Ataky , Alceu de Souza Britto , Luiz Eduardo Soares de Oliveira , Alessandro Lameiras Koerich

Recent advances in artificial intelligence (AI) - particularly generative AI - present new opportunities to accelerate, or even automate, epidemiological research. Unlike disciplines based on physical experimentation, a sizable fraction of…

Computers and Society · Computer Science 2025-07-22 David Bann , Ed Lowther , Liam Wright , Yevgeniya Kovalchuk

We describe a new technique to look for evidence of the Higgs mechanism. The usual method involves seeking evidence for the Higgs boson either directly or via the indirect effect that a virtual Higgs boson would have on a variety of…

High Energy Physics - Phenomenology · Physics 2008-11-26 S. Reucroft , Y. Srivastava , J. Swain , A Widom

As AI-generated text enters the real-world at scale, institutions increasingly use commercial AI-text detectors, especially in education and academic-integrity workflows. We report a surprising empirical finding about such systems: when…

Computation and Language · Computer Science 2026-05-20 Yixuan Even Xu , Ziqian Zhong , Aditi Raghunathan , Fei Fang , J. Zico Kolter

Speech emotion recognition (SER) has gained significant attention due to its several application fields, such as mental health, education, and human-computer interaction. However, the accuracy of SER systems is hindered by high-dimensional…

Audio and Speech Processing · Electrical Eng. & Systems 2024-06-07 Alaa Nfissi , Wassim Bouachir , Nizar Bouguila , Brian Mishara

In vaccine trials with long-term participant follow-up, it is of great importance to identify surrogate markers that accurately infer long-term immune responses. These markers offer practical advantages such as providing early, indirect…

Methodology · Statistics 2025-08-28 Arthur Hughes , Layla Parast , Rodolphe Thiébaut , Boris P. Hejblum

In a randomised clinical trial, when the result of the primary endpoint shows a significant benefit, the secondary endpoints are scrutinised to identify additional effects of the treatment. However, this approach entails a risk of…

An interesting inference drawn by some Covid-19 epidemiological models is that there exists a proportion of the population who are not susceptible to infection -- even at the start of the current pandemic. This paper introduces a model of…

Quantitative Methods · Quantitative Biology 2020-09-18 Thomas Parr , Anjali Bhat , Peter Zeidman , Aimee Goel , Alexander J. Billig , Rosalyn Moran , Karl J. Friston

In this review, we present an overview of the main aspects related to the statistical evaluation of medical tests for diagnosis and prognosis. Measures of diagnostic performance for binary tests, such as sensitivity, specificity, and…

Methodology · Statistics 2020-07-16 Vanda Inacio , Maria Xose Rodriguez-Alvarez , Pilar Gayoso-Diz

Pandemic influenza has the epidemic potential to kill millions of people. While various preventive measures exist (i.a., vaccination and school closures), deciding on strategies that lead to their most effective and efficient use remains…

Machine Learning · Computer Science 2018-06-18 Pieter Libin , Timothy Verstraeten , Diederik M. Roijers , Jelena Grujic , Kristof Theys , Philippe Lemey , Ann Nowé

Despite the huge amount of literature on h-index, few papers have been devoted to the statistical analysis of h-index when a probabilistic distribution is assumed for citation counts. The present contribution relies on showing the available…

Applications · Statistics 2014-07-29 Alberto Baccini , Lucio Barabesi , Marzia Marcheselli , Luca Pratelli

Accurate immunological models offer the possibility of performing highthroughput experiments in silico that can predict, or at least suggest, in vivo phenomena. In this chapter, we compare various models of immunological memory. We first…

Artificial Intelligence · Computer Science 2010-07-05 Simon Garret , Martin Robbins , Joanne Walker , William Wilson , Uwe Aickelin

High order structures (cavities and cliques) of the gene network of influenza A virus reveal tight associations among viruses during evolution and are key signals that indicate viral cross-species infection and cause pandemics. As…

Genomics · Quantitative Biology 2022-11-08 Junjie Li , Jietong Zhao , Yanqing Su , Jiahao Shen , Yaohua Liu , Xinyue Fan , Zheng Kou