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We elaborate the idea behind Markov chain Monte Carlo (MCMC) methods in a mathematically coherent, yet simple and understandable way. To this end, we proof a pivotal convergence theorem for finite Markov chains and a minimal version of the…

Statistics Theory · Mathematics 2019-07-30 Tobias Siems

We present a new algorithm for the statistical model checking of Markov chains with respect to unbounded temporal properties, such as reachability and full linear temporal logic. The main idea is that we monitor each simulation run on the…

Logic in Computer Science · Computer Science 2016-03-04 Przemysław Daca , Thomas A. Henzinger , Jan Křetínský , Tatjana Petrov

We formulate some simple conditions under which a Markov chain may be approximated by the solution to a differential equation, with quantifiable error probabilities. The role of a choice of coordinate functions for the Markov chain is…

Probability · Mathematics 2008-04-23 R. W. R. Darling , J. R. Norris

Inference for continuous-time Markov chains (CTMCs) becomes challenging when the process is only observed at discrete time points. The exact likelihood is intractable, and existing methods often struggle even in medium-dimensional…

Methodology · Statistics 2025-07-23 Tao Tang , Lachlan Astfalck , David Dunson

On the basis of the signatures scheme without trapdoors from lattice, which is proposed by Vadim Lyubashevsky in 2012, we present a new ring signature scheme from lattice. The proposed ring signature scheme is an extension of the signatures…

Cryptography and Security · Computer Science 2014-05-14 Shangping Wang , Ru zhao

In this work we present a modified neural network model which is capable to simulate Markov Chains. We show how to express and train such a network, how to ensure given statistical properties reflected in the training data and we…

Machine Learning · Computer Science 2018-05-03 Maren Awiszus , Bodo Rosenhahn

Social networks and other large sparse data sets pose significant challenges for statistical inference, as many standard statistical methods for testing model fit are not applicable in such settings. Algebraic statistics offers a…

Methodology · Statistics 2014-01-21 Elizabeth Gross , Sonja Petrović , Despina Stasi

Sampling from the lattice Gaussian distribution has emerged as an important problem in coding, decoding and cryptography. In this paper, lattice reduction technique is adopted to Gibbs sampler for lattice Gaussian sampling. Firstly, with…

Information Theory · Computer Science 2018-12-04 Zheng Wang , Yang Huang , Shanxiang Lyu

A new Markov Chain Monte Carlo method for simulating the dynamics of molecular systems characterized by hard-core interactions is introduced. In contrast to traditional Kinetic Monte Carlo approaches, where the state of the system is…

Computational Physics · Physics 2017-02-07 Liborio I. Costa

Markov decision processes are typically used for sequential decision making under uncertainty. For many aspects however, ranging from constrained or safe specifications to various kinds of temporal (non-Markovian) dependencies in task and…

Artificial Intelligence · Computer Science 2021-11-10 Nicky Lenaers , Martijn van Otterlo

We propose a new type of approximate counting algorithms for the problems of enumerating the number of independent sets and proper colorings in low degree graphs with large girth. Our algorithms are not based on a commonly used Markov chain…

Probability · Mathematics 2007-05-23 Antar Bandyopadhyay , David Gamarnik

The aim of this work is to provide a rigorous mathematical analysis of a stochastic concatenation model presented by Sobottka and Hart (2011) which allows approximation of the first-order stochastic structure in bacterial DNA by means of a…

Genomics · Quantitative Biology 2019-11-28 Andrew G. Hart , M. Sobottka

The pseudo likelihood method of Besag(1974), has remained a popular method for estimating Markov random field on a very large lattice, despite various documented deficiencies. This is partly because it remains the only computationally…

Methodology · Statistics 2016-01-12 Wanchuang Zhu , Yanan Fan

We consider the problem of identity testing of Markov chain transition matrices based on a single trajectory of observations under the distance notion introduced by Daskalakis et al. [2018a] and further analyzed by Cherapanamjeri and…

Statistics Theory · Mathematics 2022-03-14 Sela Fried , Geoffrey Wolfer

Motivated by information geometry, a distance function on the space of stochastic matrices is advocated. Starting with sequences of Markov chains the Bhattacharyya angle is advocated as the natural tool for comparing both short and long…

Probability · Mathematics 2025-05-06 Antony R. Lee , Peter Tino , Iain Bruce Styles

Lattice-linearity was introduced as a way to model problems using predicates that induce a lattice among the global states (Garg, SPAA 2020). A key property of \textit{the predicate} representing such problems is that it induces…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-11-28 Arya Tanmay Gupta , Sandeep S Kulkarni

The academic community has made outstanding achievements in researching the March algorithm. However, the current fault modeling method, which centers on fault primitives, cannot be directly applied to analyzing the March algorithm. This…

Hardware Architecture · Computer Science 2023-09-08 Yindong Xiao , Shanshan Lu , Ensheng Wang , Ruiqi Zhu , Zhijian Dai

Performing Bayesian inference via Markov chain Monte Carlo (MCMC) can be exceedingly expensive when posterior evaluations invoke the evaluation of a computationally expensive model, such as a system of partial differential equations. In…

Computation · Statistics 2017-12-27 Patrick Conrad , Andrew Davis , Youssef Marzouk , Natesh Pillai , Aaron Smith

Markov chains are a convenient means of generating realizations of networks, since they require little more than a procedure for rewiring edges. If a rewiring procedure exists for generating new graphs with specified statistical properties,…

Social and Information Networks · Computer Science 2012-02-17 Jaideep Ray , Ali Pinar , C. Seshadhri

We attempt to trace the history and development of Markov chain Monte Carlo (MCMC) from its early inception in the late 1940s through its use today. We see how the earlier stages of Monte Carlo (MC, not MCMC) research have led to the…

Computation · Statistics 2012-01-10 Christian Robert , George Casella