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We introduce a path sampling method for the computation of rate constants for systems with a highly diffusive character. Based on the recently developed algorithm of transition interface sampling (TIS) this procedure increases the…

Statistical Mechanics · Physics 2009-11-10 Daniele Moroni , Peter G. Bolhuis , Titus S. van Erp

We investigate a stochastic version of the synthetic multicellular clock model proposed by Garcia-Ojalvo, Elowitz and Strogatz. By introducing dynamical noise in the model and assuming that the partial observations of the system can be…

Computation · Statistics 2015-12-15 Inés P. Mariño , Joaquin Miguez , Alexey Zaikin

The hypergraph offers a platform to study structural properties emerging from more complicated and higher-order than pairwise interactions among constituents and dynamical behavior such as the spread of information or disease. Recently, a…

Physics and Society · Physics 2020-01-01 Bukyoung Jhun , Minjae Jo , B. Kahng

We study the susceptible-infected-susceptible (SIS) model on directed complex networks within the quenched mean-field approximation. Combining results from random matrix theory with an analytic approach to the distribution of fixed-point…

Physics and Society · Physics 2025-12-12 Vinícius B. Müller , Fernando L. Metz

Importance Sampling (IS) is a method for approximating expectations under a target distribution using independent samples from a proposal distribution and the associated importance weights. In many applications, the target distribution is…

Machine Learning · Statistics 2022-09-14 Gabriel Cardoso , Sergey Samsonov , Achille Thin , Eric Moulines , Jimmy Olsson

For statistical analysis of multiway contingency tables we propose modeling interaction terms in each maximal compact component of a hierarchical model. By this approach we can search for parsimonious models with smaller degrees of freedom…

Statistics Theory · Mathematics 2011-08-23 Hisayuki Hara , Tomonari Sei , Akimichi Takemura

Reliability updating refers to a problem that integrates Bayesian updating technique with structural reliability analysis and cannot be directly solved by structural reliability methods (SRMs) when it involves equality information. The…

Machine Learning · Computer Science 2023-04-19 Xiong Xiao , Zeyu Wang , Quanwang Li

Since the introduction of the lasso in regression, various sparse methods have been developed in an unsupervised context like sparse principal component analysis (s-PCA), sparse canonical correlation analysis (s-CCA) and sparse singular…

Methodology · Statistics 2020-12-09 Ruiping Liu , Ndeye Niang , Gilbert Saporta , Huiwen Wang

Two-phase outcome dependent sampling (ODS) is widely used in many fields, especially when certain covariates are expensive and/or difficult to measure. For two-phase ODS, the conditional maximum likelihood (CML) method is very attractive…

Methodology · Statistics 2022-12-21 Menglu Che , Peisong Han , Jerald F. Lawless

Cognitive diagnosis models (CDMs) are useful statistical tools to provide rich information relevant for intervention and learning. As a popular approach to estimate and make inference of CDMs, the Markov chain Monte Carlo (MCMC) algorithm…

Methodology · Statistics 2021-02-16 Juntao Wang , Ningzhong Shi , Xue Zhang , Gongjun Xu

Bayesian inference for models that have an intractable partition function is known as a doubly intractable problem, where standard Monte Carlo methods are not applicable. The past decade has seen the development of auxiliary variable Monte…

Computation · Statistics 2017-10-13 Richard G. Everitt , Dennis Prangle , Philip Maybank , Mark Bell

The COVID-19 pandemic has had a substantial impact on hospital services, as many institutions have observed a surge in healthcare-associated infections (HAIs) despite heightened adherence to isolation protocols and hand hygiene. According…

Applications · Statistics 2023-10-12 Paulo Dourado , Antonio C. Pedroso-de-Lima , Francisco M. M. Rocha

We establish an ordering criterion for the asymptotic variances of two consistent Markov chain Monte Carlo (MCMC) estimators: an importance sampling (IS) estimator, based on an approximate reversible chain and subsequent IS weighting, and a…

Computation · Statistics 2020-07-06 Jordan Franks , Matti Vihola

In this article, we construct a numerical method for a stochastic version of the Susceptible Infected Susceptible (SIS) epidemic model, expressed by a suitable stochastic differential equation (SDE), by using the semi-discrete method to a…

Numerical Analysis · Mathematics 2023-07-28 Yiannis Kiouvrekis , Ioannis S. Stamatiou

Motivated by the growing interest in today's massive parallel computing capabilities we analyze a queueing network with many servers in parallel to which jobs arrive a according to a Poisson process. Each job, upon arrival, is split into…

Probability · Mathematics 2015-07-20 Mariana Olvera-Cravioto , Octavio Ruiz-Lacedelli

Measurement samples are often taken in various monitoring applications. To reduce the sensing cost, it is desirable to achieve better sensing quality while using fewer samples. Compressive Sensing (CS) technique finds its role when the…

Information Theory · Computer Science 2016-11-18 Ying Li , Kun Xie , Xin Wang

We extend the simplex-in-cell (SIC) technique recently introduced in the context of collisionless dark matter fluids (Abel et al. 2012; Hahn et al. 2012) to the case of collisionless plasmas. The six-dimensional phase space distribution…

Computational Physics · Physics 2015-06-25 Julian Kates-Harbeck , Samuel Totorica , Jonathan Zrake , Tom Abel

Importance Sampling (IS), an effective variance reduction strategy in Monte Carlo (MC) simulation, is frequently utilized for Bayesian inference and other statistical challenges. Quasi-Monte Carlo (QMC) replaces the random samples in MC…

Numerical Analysis · Mathematics 2024-03-19 Zhijian He , Hejin Wang , Xiaoqun Wang

Time in-homogeneous cyclic Markov chain Monte Carlo (MCMC) samplers, including deterministic scan Gibbs samplers and Metropolis within Gibbs samplers, are extensively used for sampling from multi-dimensional distributions. We establish a…

Computation · Statistics 2024-05-17 Haoxiang Li , Qian Qin

We develop a new method to sample from posterior distributions in hierarchical models without using Markov chain Monte Carlo. This method, which is a variant of importance sampling ideas, is generally applicable to high-dimensional models…

Computation · Statistics 2015-03-19 Michael Braun , Paul Damien