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Related papers: Quantitative aspects of L-type calcium currents

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Neurons are spatially extended cells; different parts of a neuron have specific voltage dynamics. Important types of neurons even generate different spikes in different parts of the cell. Neurons' inputs are also often spatially…

Neurons and Cognition · Quantitative Biology 2026-02-06 Audrey O'Brien Teasley , Gabriel Koch Ocker

An analytical inactivation cross section formula based on the analytical formula for calculating the radial dose distribution of Awad et al. (Awad et al., 2018) was proposed. The formula is a multi-hit model based on the track structure…

Medical Physics · Physics 2019-03-28 E. M. Awada , M. Abu-Shady

Aqueous lithium chloride solutions up to very high concentrations were investigated in classical molecular dynamics simulations. Various force fields based on the 12-6 Lennard-Jones model, parametrized for non-polarizable water solvent…

Soft Condensed Matter · Physics 2017-07-31 Ildikó Pethes

Calcium (Ca2+) signalling is one of the most important mechanisms of information propagation in the body. In embryogenesis the interplay between Ca2+ signalling and mechanical forces is critical to the healthy development of an embryo but…

Quantitative Methods · Quantitative Biology 2019-01-23 Katerina Kaouri , Philip K. Maini , Paris Skourides , Neophytos Christodoulou , S. Jonathan Chapman

Nonlinear biophysical properties of individual neurons are known to play a major role in the nervous system. Earlier electrophysiological studies have made use of piecewise linear characterization of voltage clamped neurons, which consists…

Neurons and Cognition · Quantitative Biology 2010-07-07 Christophe Magnani , L. E. Moore

We give an explicit formula for the membrane potential of cells in terms of the intracellular and extracellular ionic concentrations, and derive equations for the ionic currents that flow through channels, exchangers and electrogenic pumps…

Biological Physics · Physics 2007-05-23 Lars Petter Endresen , Kevin Hall

Model of biological effects of ionizing particles, especially of protons and other ions, is proposed. The model is based on distinguishing the single-particle and collective effects of the underlying radiobiological mechanism. The…

Biological Physics · Physics 2016-08-16 Pavel Kundrát , Miloš Lokajíček , Hana Hromčíková

Calcium imaging is a critical tool for measuring the activity of large neural populations. Much effort has been devoted to developing "pre-processing" tools for calcium video data, addressing the important issues of e.g., motion correction,…

Neurons and Cognition · Quantitative Biology 2020-06-09 Xue-Xin Wei , Ding Zhou , Andres Grosmark , Zaki Ajabi , Fraser Sparks , Pengcheng Zhou , Mark Brandon , Attila Losonczy , Liam Paninski

Using periodic boundary conditions and a constant applied field, we have simulated current flow through an 8.125 Angstrom internal diameter, rigid, atomistic channel with polar walls in a rigid membrane using explicit ions and SPC/E water.…

Biological Physics · Physics 2009-11-07 Paul S. Crozier , Douglas Henderson , Richard L. Rowley , David D. Busath

Bulk properties of ionic liquid crystals are investigated using density functional theory. The liquid crystal molecules are represented by ellipsoidal particles with charges located in their center or at their tails. Attractive interactions…

Soft Condensed Matter · Physics 2015-05-18 S. Kondrat , M. Bier , L. Harnau

Ionic liquids (ILs), also known as room-temperature molten salts, are composed of pure ions with melting points usually below 100 degrees centigrade. Because of their low volatility and vast amounts of species, ILs can serve as "green…

Soft Condensed Matter · Physics 2022-10-27 Chenyu Tang , Yanting Wang

In this article we compare electrical conductance events from single channel recordings of three TRP channel proteins (TRPA1, TRPM2 and TRPM8) expressed in human embryonic kidney cells with channel events recorded on synthetic lipid…

We present a comprehensive study of electron collisions with calcium atoms by using the convergent \emph{B}-spline \emph{R}-matrix method. Elastic, excitation, and ionization cross sections were obtained for all transitions between the…

Atomic Physics · Physics 2019-01-16 Oleg Zatsarinny , Henry Parker , Klaus Bartschat

For the successful implementation of organic electrochemical transistors in neuromorphic computing, bioelectronics, and real-time sensing applications it is essential to understand the factors that influence device switching times. Here we…

Applied Physics · Physics 2024-10-10 Juan Bisquert , Nir Tessler

A quantized physical framework, called the five-anchor model, is developed for a general understanding of the working mechanism of ion channels. According to the hypotheses of this model, the following two basic physical principles are…

Neurons and Cognition · Quantitative Biology 2018-08-07 Hao Wang , Jiahui Wang , Xin Yuan Thow , Chengkuo Lee

Ions in water are the liquid of life. Life occurs almost entirely in 'salt water'. Water itself (without ions) is lethal to animal cells and damaging for most proteins. Water must contain the right ions in the right amounts if it is to…

Biomolecules · Quantitative Biology 2010-09-10 Bob Eisenberg

Rapid transduction of sensory stimulation to action is essential for an animal to survive. To this end, most animals use the sub-second excitable and multistable dynamics of a neuromuscular system. Here, studying an animal without neurons…

Biological Physics · Physics 2021-07-08 Matthew S. Bull , Laurel A. Kroo , Manu Prakash

Travelling waves of neural firing activity are observed in brain tissue as a part of various sensory, motor and cognitive processes. They represent an object of major interest in the study of excitable networks, with analysis conducted in…

Neurons and Cognition · Quantitative Biology 2025-11-10 Henry D. J. Kerr , Peter Ashwin , Kyle C. A. Wedgwood

This work proposes a two-dimensional electrophysiological model for describing neuronal responses to external electric stimuli under patch-clamped conditions. Our proposed model successfully captures the key features of the Hodgkin-Huxley…

Neurons and Cognition · Quantitative Biology 2023-12-13 Lízia Maria Gonçalves Branco , Rui Manuel Agostinho Dilão

Vesicle-mediated secretion of ions or molecules is a central mechanism of cellular communication, for example in processes such as neurotransmission or hormone release. These events are inherently stochastic: vesicle fusions lead to bursts…

Statistical Mechanics · Physics 2026-05-08 Jan Hauke , Julian B. Voits , Ulrich S. Schwarz
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